Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.21■□□□□ 0.35
RFC5P40937 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.21■□□□□ 0.35
RFC5P40937 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC5P40937 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.21■□□□□ 0.35
RFC5P40937 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RFC5P40937 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
RFC5P40937 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC5P40937 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC5P40937 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFC5P40937 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.21■□□□□ 0.35
RFC5P40937 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RFC5P40937 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
RFC5P40937 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFC5P40937 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RFC5P40937 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.21■□□□□ 0.35
RFC5P40937 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.21■□□□□ 0.35
RFC5P40937 U91328.1-201ENST00000437528 223 ntBASIC17.21■□□□□ 0.35
RFC5P40937 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFC5P40937 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.21■□□□□ 0.35
RFC5P40937 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFC5P40937 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.21■□□□□ 0.35
RFC5P40937 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFC5P40937 AC106886.1-201ENST00000568660 600 ntBASIC17.21■□□□□ 0.35
RFC5P40937 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.21■□□□□ 0.35
RFC5P40937 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.21■□□□□ 0.35
RFC5P40937 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.21■□□□□ 0.35
RFC5P40937 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC17.21■□□□□ 0.35
RFC5P40937 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.21■□□□□ 0.35
RFC5P40937 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC5P40937 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC5P40937 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC5P40937 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.21■□□□□ 0.35
RFC5P40937 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
RFC5P40937 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC5P40937 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFC5P40937 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.21■□□□□ 0.35
RFC5P40937 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFC5P40937 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
RFC5P40937 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFC5P40937 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
RFC5P40937 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFC5P40937 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
RFC5P40937 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFC5P40937 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
RFC5P40937 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.34
RFC5P40937 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RFC5P40937 AC092127.1-201ENST00000567093 3455 ntBASIC17.2■□□□□ 0.34
RFC5P40937 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 AC023824.1-201ENST00000562945 2975 ntBASIC17.2■□□□□ 0.34
RFC5P40937 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.2■□□□□ 0.34
RFC5P40937 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.2■□□□□ 0.34
RFC5P40937 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
RFC5P40937 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 RPL5P21-201ENST00000404620 815 ntBASIC17.2■□□□□ 0.34
RFC5P40937 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.2■□□□□ 0.34
RFC5P40937 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.2■□□□□ 0.34
RFC5P40937 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.2■□□□□ 0.34
RFC5P40937 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.2■□□□□ 0.34
RFC5P40937 AC009486.1-201ENST00000569860 813 ntBASIC17.2■□□□□ 0.34
RFC5P40937 MIR5189-201ENST00000577370 114 ntBASIC17.2■□□□□ 0.34
RFC5P40937 AL162274.1-201ENST00000617191 1098 ntBASIC17.2■□□□□ 0.34
RFC5P40937 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.2■□□□□ 0.34
RFC5P40937 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RFC5P40937 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RFC5P40937 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.2■□□□□ 0.34
RFC5P40937 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFC5P40937 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.19■□□□□ 0.34
RFC5P40937 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.19■□□□□ 0.34
RFC5P40937 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 CICP13-201ENST00000422015 2789 ntBASIC17.19■□□□□ 0.34
RFC5P40937 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RFC5P40937 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.19■□□□□ 0.34
RFC5P40937 GK-202ENST00000378941 458 ntTSL 3 BASIC17.19■□□□□ 0.34
RFC5P40937 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RFC5P40937 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFC5P40937 TMEM14DP-201ENST00000422205 345 ntBASIC17.19■□□□□ 0.34
RFC5P40937 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.19■□□□□ 0.34
RFC5P40937 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.19■□□□□ 0.34
RFC5P40937 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms