Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
COL15A1P39059 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.56■□□□□ 0.72
COL15A1P39059 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 AL139094.1-201ENST00000405549 1188 ntBASIC19.56■□□□□ 0.72
COL15A1P39059 TISP43-201ENST00000409793 538 ntTSL 4 BASIC19.56■□□□□ 0.72
COL15A1P39059 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 NUS1P3-201ENST00000423502 862 ntBASIC19.56■□□□□ 0.72
COL15A1P39059 FOS-206ENST00000555347 1280 ntTSL 2 BASIC19.56■□□□□ 0.72
COL15A1P39059 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
COL15A1P39059 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
COL15A1P39059 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
COL15A1P39059 RN7SL190P-201ENST00000582519 257 ntBASIC19.56■□□□□ 0.72
COL15A1P39059 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.56■□□□□ 0.72
COL15A1P39059 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.56■□□□□ 0.72
COL15A1P39059 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.56■□□□□ 0.72
COL15A1P39059 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.55■□□□□ 0.72
COL15A1P39059 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
COL15A1P39059 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.55■□□□□ 0.72
COL15A1P39059 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.55■□□□□ 0.72
COL15A1P39059 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
COL15A1P39059 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 LRRC59-203ENST00000576448 1531 ntBASIC19.55■□□□□ 0.72
COL15A1P39059 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
COL15A1P39059 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
COL15A1P39059 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
COL15A1P39059 PCDHA1-201ENST00000378133 2726 ntBASIC19.55■□□□□ 0.72
COL15A1P39059 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
COL15A1P39059 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.55■□□□□ 0.72
COL15A1P39059 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.55■□□□□ 0.72
COL15A1P39059 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.55■□□□□ 0.72
COL15A1P39059 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.55■□□□□ 0.72
COL15A1P39059 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC19.55■□□□□ 0.72
COL15A1P39059 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC19.55■□□□□ 0.72
COL15A1P39059 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
COL15A1P39059 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.55■□□□□ 0.72
COL15A1P39059 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.55■□□□□ 0.72
COL15A1P39059 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
COL15A1P39059 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.55■□□□□ 0.72
COL15A1P39059 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL15A1P39059 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.55■□□□□ 0.72
COL15A1P39059 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL15A1P39059 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL15A1P39059 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
COL15A1P39059 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL15A1P39059 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL15A1P39059 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.54■□□□□ 0.72
COL15A1P39059 KRT8P14-201ENST00000414254 1442 ntBASIC19.54■□□□□ 0.72
COL15A1P39059 AC010491.1-201ENST00000563101 2797 ntBASIC19.54■□□□□ 0.72
COL15A1P39059 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL15A1P39059 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
COL15A1P39059 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
COL15A1P39059 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
COL15A1P39059 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.54■□□□□ 0.72
COL15A1P39059 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.54■□□□□ 0.72
COL15A1P39059 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.54■□□□□ 0.72
COL15A1P39059 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL15A1P39059 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
COL15A1P39059 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL15A1P39059 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL15A1P39059 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.53■□□□□ 0.72
COL15A1P39059 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.53■□□□□ 0.72
COL15A1P39059 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
COL15A1P39059 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL15A1P39059 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.53■□□□□ 0.72
COL15A1P39059 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.53■□□□□ 0.72
COL15A1P39059 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
COL15A1P39059 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL15A1P39059 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL15A1P39059 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL15A1P39059 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL15A1P39059 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL15A1P39059 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL15A1P39059 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.53■□□□□ 0.72
COL15A1P39059 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
COL15A1P39059 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms