Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.45□□□□□ -0.26
CD40P25942 KRT43P-201ENST00000434019 910 ntBASIC13.45□□□□□ -0.26
CD40P25942 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.45□□□□□ -0.26
CD40P25942 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.45□□□□□ -0.26
CD40P25942 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.45□□□□□ -0.26
CD40P25942 AC234783.1-201ENST00000441761 496 ntBASIC13.45□□□□□ -0.26
CD40P25942 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.45□□□□□ -0.26
CD40P25942 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.45□□□□□ -0.26
CD40P25942 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 USP32P1-208ENST00000506594 1164 ntBASIC13.45□□□□□ -0.26
CD40P25942 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.45□□□□□ -0.26
CD40P25942 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.45□□□□□ -0.26
CD40P25942 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.45□□□□□ -0.26
CD40P25942 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.45□□□□□ -0.26
CD40P25942 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.45□□□□□ -0.26
CD40P25942 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.45□□□□□ -0.26
CD40P25942 AC107373.2-201ENST00000607735 490 ntBASIC13.45□□□□□ -0.26
CD40P25942 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.45□□□□□ -0.26
CD40P25942 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CD40P25942 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.45□□□□□ -0.26
CD40P25942 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.45□□□□□ -0.26
CD40P25942 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.45□□□□□ -0.26
CD40P25942 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.45□□□□□ -0.26
CD40P25942 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.45□□□□□ -0.26
CD40P25942 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.45□□□□□ -0.26
CD40P25942 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CD40P25942 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.45□□□□□ -0.26
CD40P25942 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CD40P25942 AL391005.1-201ENST00000623953 2435 ntBASIC13.44□□□□□ -0.26
CD40P25942 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.44□□□□□ -0.26
CD40P25942 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.44□□□□□ -0.26
CD40P25942 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CD40P25942 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
CD40P25942 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.44□□□□□ -0.26
CD40P25942 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.44□□□□□ -0.26
CD40P25942 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.44□□□□□ -0.26
CD40P25942 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.44□□□□□ -0.26
CD40P25942 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.44□□□□□ -0.26
CD40P25942 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CD40P25942 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.44□□□□□ -0.26
CD40P25942 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.44□□□□□ -0.26
CD40P25942 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.44□□□□□ -0.26
CD40P25942 AP001063.1-201ENST00000568332 529 ntBASIC13.44□□□□□ -0.26
CD40P25942 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.44□□□□□ -0.26
CD40P25942 CLUHP6-201ENST00000580789 941 ntBASIC13.44□□□□□ -0.26
CD40P25942 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CD40P25942 AL512343.1-201ENST00000605837 169 ntBASIC13.44□□□□□ -0.26
CD40P25942 MIR6805-201ENST00000615055 62 ntBASIC13.44□□□□□ -0.26
CD40P25942 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.44□□□□□ -0.26
CD40P25942 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CD40P25942 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
CD40P25942 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.44□□□□□ -0.26
CD40P25942 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.44□□□□□ -0.26
CD40P25942 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CD40P25942 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.44□□□□□ -0.26
CD40P25942 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.44□□□□□ -0.26
CD40P25942 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.44□□□□□ -0.26
CD40P25942 AC018665.1-201ENST00000622927 1362 ntBASIC13.44□□□□□ -0.26
CD40P25942 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CD40P25942 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
CD40P25942 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CD40P25942 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
CD40P25942 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CD40P25942 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms