Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH3P22223 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CDH3P22223 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH3P22223 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH3P22223 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CDH3P22223 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH3P22223 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CDH3P22223 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH3P22223 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH3P22223 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.42■□□□□ 0.06
CDH3P22223 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CDH3P22223 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CDH3P22223 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDH3P22223 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH3P22223 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH3P22223 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.41■□□□□ 0.06
CDH3P22223 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
CDH3P22223 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
CDH3P22223 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
CDH3P22223 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH3P22223 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.41■□□□□ 0.06
CDH3P22223 COX20P2-201ENST00000452636 358 ntBASIC15.41■□□□□ 0.06
CDH3P22223 SDHAP3-202ENST00000515467 728 ntBASIC15.41■□□□□ 0.06
CDH3P22223 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.41■□□□□ 0.06
CDH3P22223 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.41■□□□□ 0.06
CDH3P22223 ZNF890P-202ENST00000530367 1156 ntBASIC15.41■□□□□ 0.06
CDH3P22223 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.41■□□□□ 0.06
CDH3P22223 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH3P22223 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.41■□□□□ 0.06
CDH3P22223 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.41■□□□□ 0.06
CDH3P22223 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDH3P22223 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH3P22223 AC004840.1-201ENST00000636359 365 ntBASIC15.41■□□□□ 0.06
CDH3P22223 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH3P22223 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CDH3P22223 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CDH3P22223 KRT8P37-201ENST00000451609 1420 ntBASIC15.41■□□□□ 0.06
CDH3P22223 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CDH3P22223 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.41■□□□□ 0.06
CDH3P22223 AC073347.1-201ENST00000421633 2643 ntBASIC15.41■□□□□ 0.06
CDH3P22223 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.41■□□□□ 0.06
CDH3P22223 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CDH3P22223 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.41■□□□□ 0.06
CDH3P22223 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH3P22223 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH3P22223 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH3P22223 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH3P22223 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH3P22223 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CDH3P22223 AC022532.1-201ENST00000624563 1728 ntBASIC15.4■□□□□ 0.06
CDH3P22223 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH3P22223 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDH3P22223 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CDH3P22223 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CDH3P22223 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH3P22223 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH3P22223 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.4■□□□□ 0.06
CDH3P22223 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH3P22223 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH3P22223 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CDH3P22223 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CDH3P22223 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH3P22223 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH3P22223 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
CDH3P22223 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH3P22223 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH3P22223 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH3P22223 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH3P22223 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH3P22223 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH3P22223 AC190387.1-201ENST00000551683 408 ntBASIC15.4■□□□□ 0.06
CDH3P22223 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.4■□□□□ 0.06
CDH3P22223 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.4■□□□□ 0.06
CDH3P22223 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH3P22223 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.4■□□□□ 0.06
CDH3P22223 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.4■□□□□ 0.06
CDH3P22223 AL109936.8-201ENST00000641772 604 ntBASIC15.4■□□□□ 0.06
CDH3P22223 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms