Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD4O95243 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
MBD4O95243 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
MBD4O95243 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD4O95243 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD4O95243 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.56■□□□□ 0.56
MBD4O95243 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD4O95243 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.56■□□□□ 0.56
MBD4O95243 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
MBD4O95243 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MBD4O95243 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.56■□□□□ 0.56
MBD4O95243 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.56■□□□□ 0.56
MBD4O95243 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MBD4O95243 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.56■□□□□ 0.56
MBD4O95243 USP32P1-208ENST00000506594 1164 ntBASIC18.56■□□□□ 0.56
MBD4O95243 TDH-203ENST00000531764 1110 ntBASIC18.56■□□□□ 0.56
MBD4O95243 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.56■□□□□ 0.56
MBD4O95243 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MBD4O95243 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.56■□□□□ 0.56
MBD4O95243 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.56■□□□□ 0.56
MBD4O95243 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC18.56■□□□□ 0.56
MBD4O95243 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD4O95243 MSTO2P-201ENST00000314835 1709 ntBASIC18.56■□□□□ 0.56
MBD4O95243 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.56■□□□□ 0.56
MBD4O95243 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD4O95243 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD4O95243 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD4O95243 AL138799.1-201ENST00000448213 1675 ntBASIC18.56■□□□□ 0.56
MBD4O95243 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.56■□□□□ 0.56
MBD4O95243 AC020658.6-201ENST00000623564 1870 ntBASIC18.56■□□□□ 0.56
MBD4O95243 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD4O95243 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD4O95243 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.56■□□□□ 0.56
MBD4O95243 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD4O95243 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.55■□□□□ 0.56
MBD4O95243 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD4O95243 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.55■□□□□ 0.56
MBD4O95243 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD4O95243 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD4O95243 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.55■□□□□ 0.56
MBD4O95243 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
MBD4O95243 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD4O95243 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD4O95243 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD4O95243 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD4O95243 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD4O95243 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.55■□□□□ 0.56
MBD4O95243 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD4O95243 ACTG1P3-201ENST00000431775 1114 ntBASIC18.55■□□□□ 0.56
MBD4O95243 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.55■□□□□ 0.56
MBD4O95243 AP001582.1-201ENST00000525856 295 ntBASIC18.55■□□□□ 0.56
MBD4O95243 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.55■□□□□ 0.56
MBD4O95243 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.55■□□□□ 0.56
MBD4O95243 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.55■□□□□ 0.56
MBD4O95243 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.55■□□□□ 0.56
MBD4O95243 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.55■□□□□ 0.56
MBD4O95243 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.55■□□□□ 0.56
MBD4O95243 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD4O95243 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD4O95243 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD4O95243 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.55■□□□□ 0.56
MBD4O95243 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.55■□□□□ 0.56
MBD4O95243 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD4O95243 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
MBD4O95243 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
MBD4O95243 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.54■□□□□ 0.56
MBD4O95243 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.54■□□□□ 0.56
MBD4O95243 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.54■□□□□ 0.56
MBD4O95243 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.54■□□□□ 0.56
MBD4O95243 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.54■□□□□ 0.56
MBD4O95243 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
MBD4O95243 AC079776.1-201ENST00000401540 1152 ntBASIC18.54■□□□□ 0.56
MBD4O95243 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.54■□□□□ 0.56
MBD4O95243 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.54■□□□□ 0.56
MBD4O95243 AC015936.2-201ENST00000593177 259 ntBASIC18.54■□□□□ 0.56
MBD4O95243 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.54■□□□□ 0.56
MBD4O95243 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.54■□□□□ 0.56
MBD4O95243 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.54■□□□□ 0.56
MBD4O95243 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD4O95243 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms