Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC24.42■■□□□ 1.5
CHD1O14646 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1O14646 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1O14646 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC24.42■■□□□ 1.5
CHD1O14646 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC24.42■■□□□ 1.5
CHD1O14646 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1O14646 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1O14646 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1O14646 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
CHD1O14646 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1O14646 AL512306.1-201ENST00000432698 848 ntBASIC24.42■■□□□ 1.5
CHD1O14646 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1O14646 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC24.42■■□□□ 1.5
CHD1O14646 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1O14646 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC24.41■■□□□ 1.5
CHD1O14646 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
CHD1O14646 AQP7P5-201ENST00000428759 1049 ntBASIC24.41■■□□□ 1.5
CHD1O14646 AQP7P4-201ENST00000447083 1042 ntBASIC24.41■■□□□ 1.5
CHD1O14646 AQP7P2-201ENST00000453967 1041 ntBASIC24.41■■□□□ 1.5
CHD1O14646 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC24.41■■□□□ 1.5
CHD1O14646 IGHEP1-201ENST00000521393 651 ntBASIC24.41■■□□□ 1.5
CHD1O14646 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CHD1O14646 MT3-203ENST00000565838 421 ntTSL 3 BASIC24.41■■□□□ 1.5
CHD1O14646 AC055811.3-201ENST00000584952 686 ntBASIC24.41■■□□□ 1.5
CHD1O14646 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC24.41■■□□□ 1.5
CHD1O14646 AQP7P3-201ENST00000624547 1041 ntBASIC24.41■■□□□ 1.5
CHD1O14646 AC002044.2-201ENST00000624910 970 ntBASIC24.41■■□□□ 1.5
CHD1O14646 AL451007.2-201ENST00000632004 563 ntBASIC24.41■■□□□ 1.5
CHD1O14646 FAM90A21P-201ENST00000510875 1396 ntBASIC24.41■■□□□ 1.5
CHD1O14646 FAM90A15P-201ENST00000514465 1395 ntBASIC24.41■■□□□ 1.5
CHD1O14646 FAM90A6P-201ENST00000515148 1394 ntBASIC24.41■■□□□ 1.5
CHD1O14646 FAM90A16P-201ENST00000526662 1395 ntBASIC24.41■■□□□ 1.5
CHD1O14646 FAM90A9P-201ENST00000527940 1395 ntBASIC24.41■■□□□ 1.5
CHD1O14646 FAM90A5P-201ENST00000528738 1395 ntBASIC24.41■■□□□ 1.5
CHD1O14646 FAM90A14P-201ENST00000530386 1395 ntBASIC24.41■■□□□ 1.5
CHD1O14646 FAM90A13P-201ENST00000534703 1395 ntBASIC24.41■■□□□ 1.5
CHD1O14646 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC24.41■■□□□ 1.5
CHD1O14646 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHD1O14646 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CHD1O14646 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
CHD1O14646 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
CHD1O14646 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC24.41■■□□□ 1.5
CHD1O14646 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC24.41■■□□□ 1.5
CHD1O14646 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHD1O14646 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHD1O14646 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC24.41■■□□□ 1.5
CHD1O14646 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC24.41■■□□□ 1.5
CHD1O14646 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHD1O14646 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CHD1O14646 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHD1O14646 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC24.41■■□□□ 1.5
CHD1O14646 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC24.41■■□□□ 1.5
CHD1O14646 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC24.41■■□□□ 1.5
CHD1O14646 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC24.41■■□□□ 1.5
CHD1O14646 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC24.41■■□□□ 1.5
CHD1O14646 AL022334.2-201ENST00000610000 484 ntBASIC24.41■■□□□ 1.5
CHD1O14646 AC133540.1-201ENST00000620845 1019 ntBASIC24.41■■□□□ 1.5
CHD1O14646 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC24.41■■□□□ 1.5
CHD1O14646 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHD1O14646 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC24.4■■□□□ 1.5
CHD1O14646 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD1O14646 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD1O14646 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD1O14646 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
CHD1O14646 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD1O14646 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHD1O14646 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC24.4■■□□□ 1.5
CHD1O14646 HNRNPA1P58-201ENST00000403629 610 ntBASIC24.4■■□□□ 1.5
CHD1O14646 BANF1P3-201ENST00000412556 261 ntBASIC24.4■■□□□ 1.5
CHD1O14646 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC24.4■■□□□ 1.5
CHD1O14646 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC24.4■■□□□ 1.5
CHD1O14646 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC24.4■■□□□ 1.5
CHD1O14646 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC24.4■■□□□ 1.5
CHD1O14646 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC24.4■■□□□ 1.5
CHD1O14646 AP001184.1-201ENST00000637936 376 ntBASIC24.4■■□□□ 1.5
CHD1O14646 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC24.4■■□□□ 1.5
CHD1O14646 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC24.4■■□□□ 1.5
CHD1O14646 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD1O14646 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CHD1O14646 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
CHD1O14646 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CHD1O14646 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC24.39■■□□□ 1.5
CHD1O14646 RPS23-204ENST00000507980 836 ntTSL 2 BASIC24.39■■□□□ 1.5
CHD1O14646 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC24.39■■□□□ 1.5
CHD1O14646 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC24.39■■□□□ 1.5
CHD1O14646 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CHD1O14646 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC24.39■■□□□ 1.5
CHD1O14646 AC007952.4-201ENST00000573866 637 ntBASIC24.39■■□□□ 1.5
CHD1O14646 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC24.39■■□□□ 1.5
CHD1O14646 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC24.39■■□□□ 1.5
CHD1O14646 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHD1O14646 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHD1O14646 ENPP7P8-202ENST00000527856 1345 ntBASIC24.39■■□□□ 1.49
CHD1O14646 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHD1O14646 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
CHD1O14646 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHD1O14646 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
CHD1O14646 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CHD1O14646 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC24.38■■□□□ 1.49
CHD1O14646 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms