Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 AC026954.1-201ENST00000429771 1293 ntBASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 KRT90P-201ENST00000549264 1064 ntBASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 BX539320.1-201ENST00000623759 877 ntBASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
TBC1D3BA6NDS4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 GAPDHP40-201ENST00000505218 1006 ntBASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 AC099398.1-201ENST00000567919 2776 ntBASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TBC1D3BA6NDS4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 GNRHR2-203ENST00000581100 1187 ntBASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 MIR6869-201ENST00000619434 62 ntBASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.8■□□□□ 0.12
TBC1D3BA6NDS4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms