Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC138749.3-201ENST00000567691 622 ntBASIC16.69■□□□□ 0.26
LMO3Q8TAP4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 AC027796.2-201ENST00000575326 344 ntBASIC16.69■□□□□ 0.26
LMO3Q8TAP4 AC116165.1-201ENST00000611806 668 ntBASIC16.69■□□□□ 0.26
LMO3Q8TAP4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.69■□□□□ 0.26
LMO3Q8TAP4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LMO3Q8TAP4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 REXO1L2P-201ENST00000425429 2069 ntBASIC16.68■□□□□ 0.26
LMO3Q8TAP4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 WASH3P-207ENST00000560956 1394 ntBASIC16.68■□□□□ 0.26
LMO3Q8TAP4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 AL512638.1-201ENST00000457493 794 ntBASIC16.68■□□□□ 0.26
LMO3Q8TAP4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 RARRES2P5-201ENST00000564013 466 ntBASIC16.68■□□□□ 0.26
LMO3Q8TAP4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 AC011270.2-201ENST00000624293 2550 ntBASIC16.68■□□□□ 0.26
LMO3Q8TAP4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.68■□□□□ 0.26
LMO3Q8TAP4 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.68■□□□□ 0.26
LMO3Q8TAP4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 REXO1L4P-201ENST00000605109 1937 ntBASIC16.67■□□□□ 0.26
LMO3Q8TAP4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 GNAQP1-201ENST00000444815 1067 ntBASIC16.67■□□□□ 0.26
LMO3Q8TAP4 DOC2GP-202ENST00000514950 1163 ntBASIC16.67■□□□□ 0.26
LMO3Q8TAP4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 AL662799.1-202ENST00000614205 422 ntBASIC16.67■□□□□ 0.26
LMO3Q8TAP4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LMO3Q8TAP4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms