Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 FAM8A4P-201ENST00000435433 1213 ntBASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 ACTG1P17-201ENST00000558391 1119 ntBASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 AC106872.11-201ENST00000605838 421 ntBASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NPAS4Q8IUM7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 AC022188.1-201ENST00000620960 1664 ntBASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 AL021578.1-201ENST00000613646 709 ntBASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 AL158070.2-201ENST00000623713 1621 ntBASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
NPAS4Q8IUM7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS4Q8IUM7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS4Q8IUM7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.58■□□□□ 0.25
NPAS4Q8IUM7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
NPAS4Q8IUM7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.25
NPAS4Q8IUM7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS4Q8IUM7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
NPAS4Q8IUM7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 AC092506.1-202ENST00000401022 528 ntBASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 FNTAP2-201ENST00000430308 634 ntBASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 AC244157.2-201ENST00000616239 1006 ntBASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 AC018735.1-201ENST00000437208 1502 ntBASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NPAS4Q8IUM7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NPAS4Q8IUM7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms