Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 Z83851.2-201ENST00000609564 659 ntBASIC15.18■□□□□ 0.02
RNF220Q5VTB9 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 AC112693.3-201ENST00000624819 1983 ntBASIC15.18■□□□□ 0.02
RNF220Q5VTB9 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF220Q5VTB9 HLA-A-201ENST00000376802 1334 ntBASIC15.17■□□□□ 0.02
RNF220Q5VTB9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 MROH4P-201ENST00000431302 1578 ntBASIC15.17■□□□□ 0.02
RNF220Q5VTB9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 PCDHA3-202ENST00000532566 4594 ntBASIC15.17■□□□□ 0.02
RNF220Q5VTB9 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF220Q5VTB9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 TCAF1P1-201ENST00000414990 2232 ntBASIC15.16■□□□□ 0.02
RNF220Q5VTB9 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF220Q5VTB9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms