Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
FOXF1Q12946 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.18□□□□□ -0.14
FOXF1Q12946 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXF1Q12946 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.18□□□□□ -0.14
FOXF1Q12946 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
FOXF1Q12946 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
FOXF1Q12946 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXF1Q12946 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF1Q12946 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF1Q12946 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXF1Q12946 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.17□□□□□ -0.14
FOXF1Q12946 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FOXF1Q12946 NORAD-201ENST00000565493 5339 ntBASIC14.17□□□□□ -0.14
FOXF1Q12946 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF1Q12946 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
FOXF1Q12946 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FOXF1Q12946 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
FOXF1Q12946 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FOXF1Q12946 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FOXF1Q12946 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 AL133267.1-201ENST00000398220 340 ntBASIC14.17□□□□□ -0.14
FOXF1Q12946 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXF1Q12946 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
FOXF1Q12946 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.17□□□□□ -0.14
FOXF1Q12946 AC002472.2-201ENST00000442739 958 ntBASIC14.17□□□□□ -0.14
FOXF1Q12946 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.17□□□□□ -0.14
FOXF1Q12946 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
FOXF1Q12946 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.17□□□□□ -0.14
FOXF1Q12946 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF1Q12946 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.17□□□□□ -0.14
FOXF1Q12946 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF1Q12946 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
FOXF1Q12946 RN7SL204P-201ENST00000582831 262 ntBASIC14.17□□□□□ -0.14
FOXF1Q12946 AC004233.3-201ENST00000607794 1269 ntBASIC14.17□□□□□ -0.14
FOXF1Q12946 AC008761.3-201ENST00000624803 892 ntBASIC14.17□□□□□ -0.14
FOXF1Q12946 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
FOXF1Q12946 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
FOXF1Q12946 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
FOXF1Q12946 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
FOXF1Q12946 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF1Q12946 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
FOXF1Q12946 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 LINC00554-201ENST00000564841 3011 ntBASIC14.17□□□□□ -0.14
FOXF1Q12946 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
FOXF1Q12946 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.17□□□□□ -0.14
FOXF1Q12946 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
FOXF1Q12946 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
FOXF1Q12946 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXF1Q12946 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
FOXF1Q12946 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
FOXF1Q12946 TMBIM7P-203ENST00000641617 1718 ntBASIC14.16□□□□□ -0.14
FOXF1Q12946 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
FOXF1Q12946 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.16□□□□□ -0.14
FOXF1Q12946 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXF1Q12946 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.16□□□□□ -0.14
FOXF1Q12946 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXF1Q12946 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.16□□□□□ -0.14
FOXF1Q12946 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
FOXF1Q12946 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.16□□□□□ -0.14
FOXF1Q12946 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.16□□□□□ -0.14
FOXF1Q12946 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.16□□□□□ -0.14
FOXF1Q12946 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 AL391069.4-201ENST00000609583 481 ntBASIC14.16□□□□□ -0.14
FOXF1Q12946 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.16□□□□□ -0.14
FOXF1Q12946 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
FOXF1Q12946 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
FOXF1Q12946 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms