Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC026434.2-201ENST00000506094 1078 ntBASIC20.41■□□□□ 0.86
COL16A1Q07092 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC20.41■□□□□ 0.86
COL16A1Q07092 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.41■□□□□ 0.86
COL16A1Q07092 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC20.41■□□□□ 0.86
COL16A1Q07092 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC20.41■□□□□ 0.86
COL16A1Q07092 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC20.41■□□□□ 0.86
COL16A1Q07092 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC20.41■□□□□ 0.86
COL16A1Q07092 PEBP1P2-201ENST00000603980 558 ntBASIC20.41■□□□□ 0.86
COL16A1Q07092 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL16A1Q07092 ZNF436-AS1-201ENST00000335648 2547 ntBASIC20.4■□□□□ 0.86
COL16A1Q07092 AC106886.4-201ENST00000623557 2502 ntBASIC20.4■□□□□ 0.86
COL16A1Q07092 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL16A1Q07092 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL16A1Q07092 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL16A1Q07092 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COL16A1Q07092 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL16A1Q07092 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
COL16A1Q07092 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL16A1Q07092 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC20.4■□□□□ 0.86
COL16A1Q07092 CYP4F23P-201ENST00000593402 1579 ntBASIC20.4■□□□□ 0.86
COL16A1Q07092 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL16A1Q07092 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
COL16A1Q07092 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC20.4■□□□□ 0.86
COL16A1Q07092 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC20.4■□□□□ 0.86
COL16A1Q07092 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC20.4■□□□□ 0.86
COL16A1Q07092 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL16A1Q07092 DBP-202ENST00000593500 712 ntTSL 2 BASIC20.4■□□□□ 0.86
COL16A1Q07092 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC20.4■□□□□ 0.86
COL16A1Q07092 MIR6720-201ENST00000611664 98 ntBASIC20.4■□□□□ 0.86
COL16A1Q07092 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL16A1Q07092 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
COL16A1Q07092 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC20.4■□□□□ 0.86
COL16A1Q07092 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.4■□□□□ 0.86
COL16A1Q07092 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
COL16A1Q07092 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
COL16A1Q07092 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
COL16A1Q07092 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.4■□□□□ 0.86
COL16A1Q07092 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
COL16A1Q07092 AC084364.1-201ENST00000551967 1556 ntBASIC20.4■□□□□ 0.86
COL16A1Q07092 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL16A1Q07092 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COL16A1Q07092 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
COL16A1Q07092 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL16A1Q07092 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL16A1Q07092 ALOX12P2-203ENST00000570921 1945 ntBASIC20.39■□□□□ 0.86
COL16A1Q07092 RN7SKP230-201ENST00000365642 335 ntBASIC20.39■□□□□ 0.86
COL16A1Q07092 AL157407.1-201ENST00000435784 904 ntBASIC20.39■□□□□ 0.86
COL16A1Q07092 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC20.39■□□□□ 0.86
COL16A1Q07092 RPSAP15-201ENST00000448168 861 ntBASIC20.39■□□□□ 0.86
COL16A1Q07092 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC20.39■□□□□ 0.86
COL16A1Q07092 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC20.39■□□□□ 0.86
COL16A1Q07092 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC20.39■□□□□ 0.86
COL16A1Q07092 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC20.39■□□□□ 0.86
COL16A1Q07092 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL16A1Q07092 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC20.39■□□□□ 0.86
COL16A1Q07092 AP001184.1-201ENST00000637936 376 ntBASIC20.39■□□□□ 0.86
COL16A1Q07092 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
COL16A1Q07092 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL16A1Q07092 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL16A1Q07092 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.39■□□□□ 0.85
COL16A1Q07092 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.39■□□□□ 0.85
COL16A1Q07092 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
COL16A1Q07092 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.39■□□□□ 0.85
COL16A1Q07092 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
COL16A1Q07092 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.39■□□□□ 0.85
COL16A1Q07092 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
COL16A1Q07092 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
COL16A1Q07092 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
COL16A1Q07092 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL16A1Q07092 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC20.38■□□□□ 0.85
COL16A1Q07092 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC20.38■□□□□ 0.85
COL16A1Q07092 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
COL16A1Q07092 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
COL16A1Q07092 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
COL16A1Q07092 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL16A1Q07092 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL16A1Q07092 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL16A1Q07092 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC20.38■□□□□ 0.85
COL16A1Q07092 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL16A1Q07092 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
COL16A1Q07092 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL16A1Q07092 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC20.38■□□□□ 0.85
COL16A1Q07092 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
COL16A1Q07092 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
COL16A1Q07092 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL16A1Q07092 AQP7P5-201ENST00000428759 1049 ntBASIC20.38■□□□□ 0.85
COL16A1Q07092 AL645933.1-201ENST00000440087 609 ntBASIC20.38■□□□□ 0.85
COL16A1Q07092 AQP7P4-201ENST00000447083 1042 ntBASIC20.38■□□□□ 0.85
COL16A1Q07092 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC20.38■□□□□ 0.85
COL16A1Q07092 AQP7P2-201ENST00000453967 1041 ntBASIC20.38■□□□□ 0.85
COL16A1Q07092 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC20.38■□□□□ 0.85
COL16A1Q07092 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC20.38■□□□□ 0.85
COL16A1Q07092 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
COL16A1Q07092 RN7SL470P-201ENST00000583069 259 ntBASIC20.38■□□□□ 0.85
COL16A1Q07092 MIR3188-201ENST00000583494 85 ntBASIC20.38■□□□□ 0.85
COL16A1Q07092 MIR6816-201ENST00000620368 66 ntBASIC20.38■□□□□ 0.85
COL16A1Q07092 AQP7P3-201ENST00000624547 1041 ntBASIC20.38■□□□□ 0.85
COL16A1Q07092 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC20.38■□□□□ 0.85
COL16A1Q07092 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
COL16A1Q07092 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms