Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.4□□□□□ -0.26
CDKN1AP38936 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.4□□□□□ -0.26
CDKN1AP38936 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.4□□□□□ -0.26
CDKN1AP38936 SOCS2P1-201ENST00000417727 557 ntBASIC13.4□□□□□ -0.26
CDKN1AP38936 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN1AP38936 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN1AP38936 KLF2P4-201ENST00000451959 1225 ntBASIC13.4□□□□□ -0.26
CDKN1AP38936 PHKG1P2-201ENST00000457537 863 ntBASIC13.4□□□□□ -0.26
CDKN1AP38936 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN1AP38936 SLED1-202ENST00000512051 380 ntBASIC13.4□□□□□ -0.26
CDKN1AP38936 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.4□□□□□ -0.26
CDKN1AP38936 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN1AP38936 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.4□□□□□ -0.26
CDKN1AP38936 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN1AP38936 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.4□□□□□ -0.26
CDKN1AP38936 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.4□□□□□ -0.26
CDKN1AP38936 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.4□□□□□ -0.26
CDKN1AP38936 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
CDKN1AP38936 AL049840.4-201ENST00000602422 811 ntBASIC13.4□□□□□ -0.26
CDKN1AP38936 AL022328.1-201ENST00000610050 478 ntBASIC13.4□□□□□ -0.26
CDKN1AP38936 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.4□□□□□ -0.26
CDKN1AP38936 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.4□□□□□ -0.26
CDKN1AP38936 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.4□□□□□ -0.26
CDKN1AP38936 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.4□□□□□ -0.26
CDKN1AP38936 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN1AP38936 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.4□□□□□ -0.26
CDKN1AP38936 AP001282.1-201ENST00000531301 1499 ntBASIC13.4□□□□□ -0.26
CDKN1AP38936 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
CDKN1AP38936 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN1AP38936 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN1AP38936 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN1AP38936 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN1AP38936 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CDKN1AP38936 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.4□□□□□ -0.26
CDKN1AP38936 ME2P1-201ENST00000426028 1970 ntBASIC13.4□□□□□ -0.27
CDKN1AP38936 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CDKN1AP38936 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CDKN1AP38936 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
CDKN1AP38936 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.39□□□□□ -0.27
CDKN1AP38936 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.39□□□□□ -0.27
CDKN1AP38936 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.39□□□□□ -0.27
CDKN1AP38936 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
CDKN1AP38936 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CDKN1AP38936 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 FAM86MP-201ENST00000340703 885 ntBASIC13.39□□□□□ -0.27
CDKN1AP38936 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.39□□□□□ -0.27
CDKN1AP38936 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CDKN1AP38936 ACTG1P3-201ENST00000431775 1114 ntBASIC13.39□□□□□ -0.27
CDKN1AP38936 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.39□□□□□ -0.27
CDKN1AP38936 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.39□□□□□ -0.27
CDKN1AP38936 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CDKN1AP38936 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.39□□□□□ -0.27
CDKN1AP38936 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.39□□□□□ -0.27
CDKN1AP38936 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.39□□□□□ -0.27
CDKN1AP38936 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.39□□□□□ -0.27
CDKN1AP38936 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.39□□□□□ -0.27
CDKN1AP38936 AL450472.2-201ENST00000603663 1156 ntBASIC13.39□□□□□ -0.27
CDKN1AP38936 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.39□□□□□ -0.27
CDKN1AP38936 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.39□□□□□ -0.27
CDKN1AP38936 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.39□□□□□ -0.27
CDKN1AP38936 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CDKN1AP38936 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.39□□□□□ -0.27
CDKN1AP38936 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CDKN1AP38936 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.39□□□□□ -0.27
CDKN1AP38936 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.39□□□□□ -0.27
CDKN1AP38936 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CDKN1AP38936 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.39□□□□□ -0.27
CDKN1AP38936 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.39□□□□□ -0.27
CDKN1AP38936 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CDKN1AP38936 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CDKN1AP38936 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms