Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXC12P31275 GNAQP1-201ENST00000444815 1067 ntBASIC13.95□□□□□ -0.18
HOXC12P31275 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXC12P31275 ZNF890P-202ENST00000530367 1156 ntBASIC13.95□□□□□ -0.18
HOXC12P31275 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXC12P31275 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.95□□□□□ -0.18
HOXC12P31275 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.95□□□□□ -0.18
HOXC12P31275 RAB43P1-201ENST00000561790 589 ntBASIC13.95□□□□□ -0.18
HOXC12P31275 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
HOXC12P31275 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.95□□□□□ -0.18
HOXC12P31275 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
HOXC12P31275 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
HOXC12P31275 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.95□□□□□ -0.18
HOXC12P31275 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HOXC12P31275 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HOXC12P31275 PCDH8P1-201ENST00000428983 2773 ntBASIC13.94□□□□□ -0.18
HOXC12P31275 AC099398.1-201ENST00000567919 2776 ntBASIC13.94□□□□□ -0.18
HOXC12P31275 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.94□□□□□ -0.18
HOXC12P31275 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.94□□□□□ -0.18
HOXC12P31275 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HOXC12P31275 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.94□□□□□ -0.18
HOXC12P31275 AC011477.6-201ENST00000604980 1927 ntBASIC13.94□□□□□ -0.18
HOXC12P31275 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HOXC12P31275 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HOXC12P31275 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.94□□□□□ -0.18
HOXC12P31275 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.94□□□□□ -0.18
HOXC12P31275 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.94□□□□□ -0.18
HOXC12P31275 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HOXC12P31275 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HOXC12P31275 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.94□□□□□ -0.18
HOXC12P31275 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.94□□□□□ -0.18
HOXC12P31275 EEF1DP4-201ENST00000446006 880 ntBASIC13.94□□□□□ -0.18
HOXC12P31275 AC022210.1-201ENST00000449856 793 ntBASIC13.94□□□□□ -0.18
HOXC12P31275 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.94□□□□□ -0.18
HOXC12P31275 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.94□□□□□ -0.18
HOXC12P31275 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
HOXC12P31275 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.94□□□□□ -0.18
HOXC12P31275 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.94□□□□□ -0.18
HOXC12P31275 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.94□□□□□ -0.18
HOXC12P31275 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
HOXC12P31275 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.94□□□□□ -0.18
HOXC12P31275 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.94□□□□□ -0.18
HOXC12P31275 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.94□□□□□ -0.18
HOXC12P31275 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.94□□□□□ -0.18
HOXC12P31275 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HOXC12P31275 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HOXC12P31275 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.94□□□□□ -0.18
HOXC12P31275 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
HOXC12P31275 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
HOXC12P31275 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.93□□□□□ -0.18
HOXC12P31275 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.93□□□□□ -0.18
HOXC12P31275 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.93□□□□□ -0.18
HOXC12P31275 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HOXC12P31275 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
HOXC12P31275 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HOXC12P31275 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HOXC12P31275 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.93□□□□□ -0.18
HOXC12P31275 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HOXC12P31275 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
HOXC12P31275 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.93□□□□□ -0.18
HOXC12P31275 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HOXC12P31275 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms