Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
BMP3P12645 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.95■□□□□ 0.46
BMP3P12645 KRT18P25-201ENST00000508931 1278 ntBASIC17.95■□□□□ 0.46
BMP3P12645 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.95■□□□□ 0.46
BMP3P12645 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.95■□□□□ 0.46
BMP3P12645 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC17.95■□□□□ 0.46
BMP3P12645 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.95■□□□□ 0.46
BMP3P12645 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.95■□□□□ 0.46
BMP3P12645 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
BMP3P12645 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.95■□□□□ 0.46
BMP3P12645 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
BMP3P12645 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
BMP3P12645 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
BMP3P12645 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BMP3P12645 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
BMP3P12645 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BMP3P12645 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BMP3P12645 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BMP3P12645 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BMP3P12645 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.95■□□□□ 0.46
BMP3P12645 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
BMP3P12645 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.94■□□□□ 0.46
BMP3P12645 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
BMP3P12645 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BMP3P12645 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.94■□□□□ 0.46
BMP3P12645 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.94■□□□□ 0.46
BMP3P12645 CICP13-201ENST00000422015 2789 ntBASIC17.94■□□□□ 0.46
BMP3P12645 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
BMP3P12645 AC099336.1-201ENST00000417053 1171 ntBASIC17.94■□□□□ 0.46
BMP3P12645 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.94■□□□□ 0.46
BMP3P12645 HLA-V-201ENST00000429037 534 ntBASIC17.94■□□□□ 0.46
BMP3P12645 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BMP3P12645 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
BMP3P12645 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.94■□□□□ 0.46
BMP3P12645 AL033527.4-201ENST00000641026 673 ntBASIC17.94■□□□□ 0.46
BMP3P12645 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BMP3P12645 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BMP3P12645 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.94■□□□□ 0.46
BMP3P12645 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
BMP3P12645 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BMP3P12645 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
BMP3P12645 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.94■□□□□ 0.46
BMP3P12645 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.94■□□□□ 0.46
BMP3P12645 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BMP3P12645 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
BMP3P12645 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.94■□□□□ 0.46
BMP3P12645 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BMP3P12645 AP005117.1-202ENST00000581724 1908 ntBASIC17.94■□□□□ 0.46
BMP3P12645 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BMP3P12645 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BMP3P12645 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
BMP3P12645 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
BMP3P12645 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.93■□□□□ 0.46
BMP3P12645 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
BMP3P12645 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
BMP3P12645 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.93■□□□□ 0.46
BMP3P12645 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.93■□□□□ 0.46
BMP3P12645 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.93■□□□□ 0.46
BMP3P12645 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.93■□□□□ 0.46
BMP3P12645 C2orf27AP3-201ENST00000434123 579 ntBASIC17.93■□□□□ 0.46
BMP3P12645 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 FO681548.1-201ENST00000455617 1132 ntBASIC17.93■□□□□ 0.46
BMP3P12645 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.93■□□□□ 0.46
BMP3P12645 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.93■□□□□ 0.46
BMP3P12645 KRT90P-201ENST00000549264 1064 ntBASIC17.93■□□□□ 0.46
BMP3P12645 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.93■□□□□ 0.46
BMP3P12645 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.93■□□□□ 0.46
BMP3P12645 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
BMP3P12645 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.93■□□□□ 0.46
BMP3P12645 AL354718.3-201ENST00000616414 581 ntBASIC17.93■□□□□ 0.46
BMP3P12645 CR382287.1-201ENST00000623954 586 ntBASIC17.93■□□□□ 0.46
BMP3P12645 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.93■□□□□ 0.46
BMP3P12645 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.93■□□□□ 0.46
BMP3P12645 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
BMP3P12645 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
BMP3P12645 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.93■□□□□ 0.46
BMP3P12645 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
BMP3P12645 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
BMP3P12645 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.93■□□□□ 0.46
BMP3P12645 PCDHA1-201ENST00000378133 2726 ntBASIC17.92■□□□□ 0.46
BMP3P12645 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BMP3P12645 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
BMP3P12645 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.92■□□□□ 0.46
BMP3P12645 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms