Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.87■□□□□ 0.29
CHRNA1P02708 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 AL603832.2-201ENST00000566195 2125 ntBASIC16.87■□□□□ 0.29
CHRNA1P02708 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHRNA1P02708 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CHRNA1P02708 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA1P02708 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA1P02708 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CHRNA1P02708 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA1P02708 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA1P02708 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA1P02708 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA1P02708 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.86■□□□□ 0.29
CHRNA1P02708 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA1P02708 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA1P02708 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA1P02708 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA1P02708 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CHRNA1P02708 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA1P02708 TPM3P8-201ENST00000330554 643 ntBASIC16.86■□□□□ 0.29
CHRNA1P02708 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CHRNA1P02708 AL139094.1-201ENST00000405549 1188 ntBASIC16.86■□□□□ 0.29
CHRNA1P02708 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.86■□□□□ 0.29
CHRNA1P02708 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.86■□□□□ 0.29
CHRNA1P02708 AP001258.2-201ENST00000529891 490 ntBASIC16.86■□□□□ 0.29
CHRNA1P02708 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA1P02708 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.86■□□□□ 0.29
CHRNA1P02708 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.86■□□□□ 0.29
CHRNA1P02708 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA1P02708 AL008638.5-201ENST00000623814 1298 ntBASIC16.86■□□□□ 0.29
CHRNA1P02708 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.86■□□□□ 0.29
CHRNA1P02708 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.86■□□□□ 0.29
CHRNA1P02708 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA1P02708 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA1P02708 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CHRNA1P02708 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA1P02708 AP003680.1-201ENST00000598970 3660 ntBASIC16.86■□□□□ 0.29
CHRNA1P02708 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA1P02708 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.86■□□□□ 0.29
CHRNA1P02708 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.86■□□□□ 0.29
CHRNA1P02708 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA1P02708 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA1P02708 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA1P02708 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CHRNA1P02708 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNA1P02708 AC084364.1-201ENST00000551967 1556 ntBASIC16.85■□□□□ 0.29
CHRNA1P02708 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 AL158070.2-201ENST00000623713 1621 ntBASIC16.85■□□□□ 0.29
CHRNA1P02708 AC024909.3-201ENST00000611513 2257 ntBASIC16.85■□□□□ 0.29
CHRNA1P02708 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA1P02708 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.85■□□□□ 0.29
CHRNA1P02708 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA1P02708 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.85■□□□□ 0.29
CHRNA1P02708 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.85■□□□□ 0.29
CHRNA1P02708 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA1P02708 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.85■□□□□ 0.29
CHRNA1P02708 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNA1P02708 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
CHRNA1P02708 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA1P02708 EEF1DP1-201ENST00000585891 896 ntBASIC16.85■□□□□ 0.29
CHRNA1P02708 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNA1P02708 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.85■□□□□ 0.29
CHRNA1P02708 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CHRNA1P02708 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA1P02708 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA1P02708 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA1P02708 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA1P02708 AC015818.8-201ENST00000587907 1519 ntBASIC16.85■□□□□ 0.29
CHRNA1P02708 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.85■□□□□ 0.29
CHRNA1P02708 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CHRNA1P02708 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CHRNA1P02708 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CHRNA1P02708 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA1P02708 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA1P02708 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
CHRNA1P02708 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.84■□□□□ 0.29
CHRNA1P02708 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA1P02708 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHRNA1P02708 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.84■□□□□ 0.29
CHRNA1P02708 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms