Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC6.79□□□□□ -1.32
USH2AO75445 AC134043.2-201ENST00000624206 2238 ntBASIC6.79□□□□□ -1.32
USH2AO75445 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC6.79□□□□□ -1.32
USH2AO75445 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC6.79□□□□□ -1.32
USH2AO75445 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 AC106827.1-201ENST00000366454 431 ntBASIC6.79□□□□□ -1.32
USH2AO75445 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC6.79□□□□□ -1.32
USH2AO75445 RBM4-207ENST00000506523 654 ntTSL 3 BASIC6.79□□□□□ -1.32
USH2AO75445 NEU3-207ENST00000534628 746 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC6.79□□□□□ -1.32
USH2AO75445 DERL2-206ENST00000572834 589 ntTSL 3 BASIC6.79□□□□□ -1.32
USH2AO75445 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC6.79□□□□□ -1.32
USH2AO75445 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 AL109837.1-201ENST00000603272 613 ntBASIC6.79□□□□□ -1.32
USH2AO75445 AC015912.3-201ENST00000619432 348 ntBASIC6.79□□□□□ -1.32
USH2AO75445 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
USH2AO75445 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC6.79□□□□□ -1.32
USH2AO75445 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
USH2AO75445 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 FAM90A7P-201ENST00000382628 1395 ntBASIC6.79□□□□□ -1.32
USH2AO75445 FAM90A23P-201ENST00000400136 1395 ntBASIC6.79□□□□□ -1.32
USH2AO75445 FAM90A21P-201ENST00000510875 1396 ntBASIC6.79□□□□□ -1.32
USH2AO75445 FAM90A15P-201ENST00000514465 1395 ntBASIC6.79□□□□□ -1.32
USH2AO75445 FAM90A6P-201ENST00000515148 1394 ntBASIC6.79□□□□□ -1.32
USH2AO75445 FAM90A16P-201ENST00000526662 1395 ntBASIC6.79□□□□□ -1.32
USH2AO75445 FAM90A9P-201ENST00000527940 1395 ntBASIC6.79□□□□□ -1.32
USH2AO75445 FAM90A5P-201ENST00000528738 1395 ntBASIC6.79□□□□□ -1.32
USH2AO75445 FAM90A14P-201ENST00000530386 1395 ntBASIC6.79□□□□□ -1.32
USH2AO75445 FAM90A13P-201ENST00000534703 1395 ntBASIC6.79□□□□□ -1.32
USH2AO75445 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC6.79□□□□□ -1.32
USH2AO75445 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
USH2AO75445 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC6.79□□□□□ -1.32
USH2AO75445 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC6.79□□□□□ -1.32
USH2AO75445 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC6.79□□□□□ -1.32
USH2AO75445 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC6.79□□□□□ -1.32
USH2AO75445 AL132994.2-201ENST00000603120 687 ntBASIC6.79□□□□□ -1.32
USH2AO75445 AL512324.3-201ENST00000619383 882 ntBASIC6.79□□□□□ -1.32
USH2AO75445 MIEF1-215ENST00000637854 213 ntBASIC6.79□□□□□ -1.32
USH2AO75445 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
USH2AO75445 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 AC090502.4-201ENST00000551714 1386 ntBASIC6.79□□□□□ -1.32
USH2AO75445 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC6.79□□□□□ -1.32
USH2AO75445 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 INE2-201ENST00000630399 1874 ntBASIC6.79□□□□□ -1.32
USH2AO75445 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
USH2AO75445 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC6.79□□□□□ -1.32
USH2AO75445 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC6.79□□□□□ -1.32
USH2AO75445 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC6.79□□□□□ -1.32
USH2AO75445 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC6.79□□□□□ -1.32
USH2AO75445 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC6.79□□□□□ -1.32
USH2AO75445 AC004466.1-201ENST00000599515 1080 ntBASIC6.79□□□□□ -1.32
USH2AO75445 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC6.79□□□□□ -1.32
USH2AO75445 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
USH2AO75445 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
USH2AO75445 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC6.79□□□□□ -1.32
USH2AO75445 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC6.79□□□□□ -1.32
USH2AO75445 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms