Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.64■□□□□ 0.09
LDB2O43679 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.64■□□□□ 0.09
LDB2O43679 SPCS2P1-201ENST00000561636 679 ntBASIC15.64■□□□□ 0.09
LDB2O43679 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.64■□□□□ 0.09
LDB2O43679 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.64■□□□□ 0.09
LDB2O43679 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LDB2O43679 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.64■□□□□ 0.09
LDB2O43679 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LDB2O43679 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LDB2O43679 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.64■□□□□ 0.09
LDB2O43679 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LDB2O43679 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LDB2O43679 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LDB2O43679 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LDB2O43679 AC148477.4-201ENST00000613430 1793 ntBASIC15.63■□□□□ 0.09
LDB2O43679 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.63■□□□□ 0.09
LDB2O43679 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LDB2O43679 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LDB2O43679 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.63■□□□□ 0.09
LDB2O43679 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.63■□□□□ 0.09
LDB2O43679 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.63■□□□□ 0.09
LDB2O43679 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.63■□□□□ 0.09
LDB2O43679 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
LDB2O43679 BASP1P1-201ENST00000430708 665 ntBASIC15.63■□□□□ 0.09
LDB2O43679 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.63■□□□□ 0.09
LDB2O43679 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.63■□□□□ 0.09
LDB2O43679 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.63■□□□□ 0.09
LDB2O43679 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.63■□□□□ 0.09
LDB2O43679 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LDB2O43679 AL589987.1-201ENST00000453380 819 ntBASIC15.63■□□□□ 0.09
LDB2O43679 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.63■□□□□ 0.09
LDB2O43679 KRT18P43-201ENST00000469825 1281 ntBASIC15.63■□□□□ 0.09
LDB2O43679 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LDB2O43679 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.63■□□□□ 0.09
LDB2O43679 AC135586.1-201ENST00000539323 574 ntBASIC15.63■□□□□ 0.09
LDB2O43679 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
LDB2O43679 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LDB2O43679 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LDB2O43679 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.63■□□□□ 0.09
LDB2O43679 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LDB2O43679 AC023024.2-201ENST00000623561 1993 ntBASIC15.63■□□□□ 0.09
LDB2O43679 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LDB2O43679 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
LDB2O43679 MST1L-201ENST00000442552 2185 ntBASIC15.63■□□□□ 0.09
LDB2O43679 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.63■□□□□ 0.09
LDB2O43679 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
LDB2O43679 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
LDB2O43679 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.63■□□□□ 0.09
LDB2O43679 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LDB2O43679 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LDB2O43679 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LDB2O43679 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.63■□□□□ 0.09
LDB2O43679 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
LDB2O43679 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LDB2O43679 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.63■□□□□ 0.09
LDB2O43679 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LDB2O43679 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LDB2O43679 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LDB2O43679 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LDB2O43679 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LDB2O43679 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LDB2O43679 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LDB2O43679 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.62■□□□□ 0.09
LDB2O43679 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LDB2O43679 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.62■□□□□ 0.09
LDB2O43679 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LDB2O43679 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LDB2O43679 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
LDB2O43679 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LDB2O43679 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
LDB2O43679 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LDB2O43679 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.62■□□□□ 0.09
LDB2O43679 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.62■□□□□ 0.09
LDB2O43679 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.62■□□□□ 0.09
LDB2O43679 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.62■□□□□ 0.09
LDB2O43679 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.62■□□□□ 0.09
LDB2O43679 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LDB2O43679 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LDB2O43679 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LDB2O43679 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LDB2O43679 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.62■□□□□ 0.09
LDB2O43679 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.62■□□□□ 0.09
LDB2O43679 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.62■□□□□ 0.09
LDB2O43679 TIMM17BP1-201ENST00000545713 516 ntBASIC15.62■□□□□ 0.09
LDB2O43679 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.62■□□□□ 0.09
LDB2O43679 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.62■□□□□ 0.09
LDB2O43679 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.62■□□□□ 0.09
LDB2O43679 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.62■□□□□ 0.09
LDB2O43679 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.62■□□□□ 0.09
LDB2O43679 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.62■□□□□ 0.09
LDB2O43679 SRD5A3P1-201ENST00000603021 949 ntBASIC15.62■□□□□ 0.09
LDB2O43679 AL391069.4-201ENST00000609583 481 ntBASIC15.62■□□□□ 0.09
LDB2O43679 AC004790.1-201ENST00000612686 536 ntBASIC15.62■□□□□ 0.09
LDB2O43679 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms