Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CLDN5O00501 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN5O00501 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN5O00501 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN5O00501 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
CLDN5O00501 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 TMEM14DP-201ENST00000422205 345 ntBASIC16.46■□□□□ 0.23
CLDN5O00501 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN5O00501 GIMAP3P-201ENST00000495150 836 ntBASIC16.46■□□□□ 0.23
CLDN5O00501 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN5O00501 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN5O00501 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN5O00501 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.46■□□□□ 0.23
CLDN5O00501 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.46■□□□□ 0.23
CLDN5O00501 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.46■□□□□ 0.23
CLDN5O00501 AC025181.2-201ENST00000606994 802 ntBASIC16.46■□□□□ 0.23
CLDN5O00501 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN5O00501 CU634019.7-201ENST00000624153 1185 ntBASIC16.46■□□□□ 0.23
CLDN5O00501 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.46■□□□□ 0.23
CLDN5O00501 FP236241.2-201ENST00000624906 1185 ntBASIC16.46■□□□□ 0.23
CLDN5O00501 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.46■□□□□ 0.23
CLDN5O00501 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 AC084364.1-201ENST00000551967 1556 ntBASIC16.46■□□□□ 0.23
CLDN5O00501 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.46■□□□□ 0.23
CLDN5O00501 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
CLDN5O00501 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLDN5O00501 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN5O00501 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN5O00501 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN5O00501 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN5O00501 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN5O00501 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN5O00501 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN5O00501 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
CLDN5O00501 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.46■□□□□ 0.22
CLDN5O00501 KRT8P22-201ENST00000562317 1415 ntBASIC16.45■□□□□ 0.22
CLDN5O00501 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN5O00501 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLDN5O00501 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN5O00501 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 C1QBPP1-201ENST00000400117 770 ntBASIC16.45■□□□□ 0.22
CLDN5O00501 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN5O00501 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN5O00501 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN5O00501 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN5O00501 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN5O00501 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN5O00501 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN5O00501 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN5O00501 AC107373.2-201ENST00000607735 490 ntBASIC16.45■□□□□ 0.22
CLDN5O00501 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CLDN5O00501 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN5O00501 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.45■□□□□ 0.22
CLDN5O00501 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN5O00501 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN5O00501 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN5O00501 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN5O00501 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN5O00501 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN5O00501 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN5O00501 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN5O00501 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN5O00501 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN5O00501 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN5O00501 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN5O00501 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN5O00501 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN5O00501 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN5O00501 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN5O00501 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN5O00501 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms