Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 MIR1227-201ENST00000408484 88 ntBASIC18.5■□□□□ 0.55
NFKBIEO00221 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC18.5■□□□□ 0.55
NFKBIEO00221 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.5■□□□□ 0.55
NFKBIEO00221 RPS9P1-201ENST00000419943 583 ntBASIC18.5■□□□□ 0.55
NFKBIEO00221 HLA-K-203ENST00000430151 1046 ntBASIC18.5■□□□□ 0.55
NFKBIEO00221 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NFKBIEO00221 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC18.5■□□□□ 0.55
NFKBIEO00221 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NFKBIEO00221 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.5■□□□□ 0.55
NFKBIEO00221 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC18.5■□□□□ 0.55
NFKBIEO00221 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.5■□□□□ 0.55
NFKBIEO00221 MIR4649-201ENST00000582839 64 ntBASIC18.5■□□□□ 0.55
NFKBIEO00221 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC18.5■□□□□ 0.55
NFKBIEO00221 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC18.5■□□□□ 0.55
NFKBIEO00221 AC127024.7-201ENST00000625101 200 ntBASIC18.5■□□□□ 0.55
NFKBIEO00221 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.5■□□□□ 0.55
NFKBIEO00221 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKBIEO00221 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKBIEO00221 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NFKBIEO00221 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NFKBIEO00221 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKBIEO00221 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.49■□□□□ 0.55
NFKBIEO00221 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
NFKBIEO00221 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKBIEO00221 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKBIEO00221 SHC1P1-201ENST00000425230 1745 ntBASIC18.49■□□□□ 0.55
NFKBIEO00221 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKBIEO00221 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKBIEO00221 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKBIEO00221 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKBIEO00221 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKBIEO00221 IGHV3-37-201ENST00000518544 340 ntBASIC18.49■□□□□ 0.55
NFKBIEO00221 AP002803.1-201ENST00000528836 498 ntBASIC18.49■□□□□ 0.55
NFKBIEO00221 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.49■□□□□ 0.55
NFKBIEO00221 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NFKBIEO00221 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NFKBIEO00221 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKBIEO00221 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC18.49■□□□□ 0.55
NFKBIEO00221 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NFKBIEO00221 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
NFKBIEO00221 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.49■□□□□ 0.55
NFKBIEO00221 AC009093.2-202ENST00000620513 2079 ntBASIC18.49■□□□□ 0.55
NFKBIEO00221 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NFKBIEO00221 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKBIEO00221 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NFKBIEO00221 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NFKBIEO00221 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKBIEO00221 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKBIEO00221 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NFKBIEO00221 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.49■□□□□ 0.55
NFKBIEO00221 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NFKBIEO00221 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.48■□□□□ 0.55
NFKBIEO00221 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NFKBIEO00221 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NFKBIEO00221 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC18.48■□□□□ 0.55
NFKBIEO00221 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC18.48■□□□□ 0.55
NFKBIEO00221 RPL7P35-201ENST00000446943 740 ntBASIC18.48■□□□□ 0.55
NFKBIEO00221 KLF2P1-201ENST00000447438 1042 ntBASIC18.48■□□□□ 0.55
NFKBIEO00221 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.48■□□□□ 0.55
NFKBIEO00221 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.48■□□□□ 0.55
NFKBIEO00221 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC18.48■□□□□ 0.55
NFKBIEO00221 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NFKBIEO00221 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NFKBIEO00221 DUX4L46-201ENST00000566845 751 ntBASIC18.48■□□□□ 0.55
NFKBIEO00221 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.48■□□□□ 0.55
NFKBIEO00221 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
NFKBIEO00221 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NFKBIEO00221 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.48■□□□□ 0.55
NFKBIEO00221 AC002472.3-201ENST00000640124 621 ntBASIC18.48■□□□□ 0.55
NFKBIEO00221 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NFKBIEO00221 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.48■□□□□ 0.55
NFKBIEO00221 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NFKBIEO00221 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.48■□□□□ 0.55
NFKBIEO00221 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC18.48■□□□□ 0.55
NFKBIEO00221 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NFKBIEO00221 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NFKBIEO00221 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NFKBIEO00221 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
NFKBIEO00221 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.47■□□□□ 0.55
NFKBIEO00221 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.47■□□□□ 0.55
NFKBIEO00221 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 CAP2P1-201ENST00000557743 1390 ntBASIC18.47■□□□□ 0.55
NFKBIEO00221 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 AC010141.1-201ENST00000411585 623 ntBASIC18.47■□□□□ 0.55
NFKBIEO00221 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 RN7SL67P-201ENST00000492147 296 ntBASIC18.47■□□□□ 0.55
NFKBIEO00221 AC026434.2-201ENST00000506094 1078 ntBASIC18.47■□□□□ 0.55
NFKBIEO00221 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC18.47■□□□□ 0.55
NFKBIEO00221 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.47■□□□□ 0.55
NFKBIEO00221 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC18.47■□□□□ 0.55
NFKBIEO00221 AC007881.3-201ENST00000608897 607 ntBASIC18.47■□□□□ 0.55
NFKBIEO00221 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NFKBIEO00221 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms