Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
DDX39AO00148 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX39AO00148 TTTY23B-201ENST00000442790 549 ntBASIC17.59■□□□□ 0.41
DDX39AO00148 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.59■□□□□ 0.41
DDX39AO00148 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.59■□□□□ 0.41
DDX39AO00148 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.59■□□□□ 0.41
DDX39AO00148 AC015910.1-201ENST00000579400 975 ntBASIC17.59■□□□□ 0.41
DDX39AO00148 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.59■□□□□ 0.41
DDX39AO00148 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
DDX39AO00148 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.59■□□□□ 0.41
DDX39AO00148 AC133539.2-201ENST00000604757 467 ntBASIC17.59■□□□□ 0.41
DDX39AO00148 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.59■□□□□ 0.41
DDX39AO00148 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.59■□□□□ 0.41
DDX39AO00148 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.59■□□□□ 0.41
DDX39AO00148 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDX39AO00148 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
DDX39AO00148 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
DDX39AO00148 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDX39AO00148 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
DDX39AO00148 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
DDX39AO00148 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
DDX39AO00148 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
DDX39AO00148 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
DDX39AO00148 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
DDX39AO00148 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
DDX39AO00148 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.58■□□□□ 0.4
DDX39AO00148 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX39AO00148 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX39AO00148 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX39AO00148 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
DDX39AO00148 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
DDX39AO00148 AC134915.1-201ENST00000426461 574 ntBASIC17.58■□□□□ 0.4
DDX39AO00148 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
DDX39AO00148 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX39AO00148 AL442647.2-201ENST00000429864 857 ntBASIC17.58■□□□□ 0.4
DDX39AO00148 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.58■□□□□ 0.4
DDX39AO00148 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.58■□□□□ 0.4
DDX39AO00148 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.58■□□□□ 0.4
DDX39AO00148 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.58■□□□□ 0.4
DDX39AO00148 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.58■□□□□ 0.4
DDX39AO00148 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.58■□□□□ 0.4
DDX39AO00148 CU634019.7-201ENST00000624153 1185 ntBASIC17.58■□□□□ 0.4
DDX39AO00148 FP236241.2-201ENST00000624906 1185 ntBASIC17.58■□□□□ 0.4
DDX39AO00148 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX39AO00148 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX39AO00148 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX39AO00148 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
DDX39AO00148 AC127383.1-201ENST00000444697 1800 ntBASIC17.58■□□□□ 0.4
DDX39AO00148 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX39AO00148 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
DDX39AO00148 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.58■□□□□ 0.4
DDX39AO00148 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
DDX39AO00148 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX39AO00148 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX39AO00148 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.57■□□□□ 0.4
DDX39AO00148 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX39AO00148 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX39AO00148 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX39AO00148 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX39AO00148 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX39AO00148 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.57■□□□□ 0.4
DDX39AO00148 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX39AO00148 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
DDX39AO00148 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
DDX39AO00148 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
DDX39AO00148 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
DDX39AO00148 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX39AO00148 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX39AO00148 AL133267.1-201ENST00000398220 340 ntBASIC17.57■□□□□ 0.4
DDX39AO00148 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDX39AO00148 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX39AO00148 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.57■□□□□ 0.4
DDX39AO00148 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.57■□□□□ 0.4
DDX39AO00148 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.57■□□□□ 0.4
DDX39AO00148 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX39AO00148 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.57■□□□□ 0.4
DDX39AO00148 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.57■□□□□ 0.4
DDX39AO00148 AC010319.3-201ENST00000597028 470 ntBASIC17.57■□□□□ 0.4
DDX39AO00148 AC000095.1-201ENST00000603208 874 ntBASIC17.57■□□□□ 0.4
DDX39AO00148 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX39AO00148 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX39AO00148 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX39AO00148 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX39AO00148 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.57■□□□□ 0.4
DDX39AO00148 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
DDX39AO00148 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX39AO00148 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX39AO00148 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX39AO00148 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDX39AO00148 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX39AO00148 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.57■□□□□ 0.4
DDX39AO00148 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms