Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 GPX1P2-201ENST00000429271 606 ntBASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 AC112191.1-201ENST00000523689 701 ntBASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 AC097376.2-205ENST00000610159 5334 ntBASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
AP4B1Q9Y6B7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 AC002056.1-201ENST00000395613 760 ntBASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 RPSAP43-201ENST00000402237 625 ntBASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 AC005829.1-201ENST00000570002 483 ntBASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 MIR3909-201ENST00000579518 119 ntBASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 AC010327.4-202ENST00000591484 748 ntBASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 CYP2A7P1-201ENST00000595391 815 ntBASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 AC092127.1-201ENST00000567093 3455 ntBASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 AC006504.5-208ENST00000588784 2401 ntBASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 AC010327.5-201ENST00000586923 3061 ntBASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
AP4B1Q9Y6B7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 PMS2P4-201ENST00000412466 1052 ntBASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 ACTG1P14-201ENST00000446382 1122 ntBASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 AC112482.1-201ENST00000492080 688 ntBASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.12■□□□□ 0.01
AP4B1Q9Y6B7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms