Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC009955.4-201ENST00000597192 544 ntBASIC19.67■□□□□ 0.74
SCN11AQ9UI33 AC138627.1-207ENST00000641560 1006 ntBASIC19.67■□□□□ 0.74
SCN11AQ9UI33 AC026691.1-201ENST00000602502 2017 ntBASIC19.67■□□□□ 0.74
SCN11AQ9UI33 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 AC106872.11-201ENST00000605838 421 ntBASIC19.67■□□□□ 0.74
SCN11AQ9UI33 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 AC091812.3-201ENST00000621362 345 ntBASIC19.67■□□□□ 0.74
SCN11AQ9UI33 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.67■□□□□ 0.74
SCN11AQ9UI33 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 AC011840.2-201ENST00000563063 1520 ntBASIC19.66■□□□□ 0.74
SCN11AQ9UI33 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.66■□□□□ 0.74
SCN11AQ9UI33 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 AC026740.1-201ENST00000607068 791 ntBASIC19.66■□□□□ 0.74
SCN11AQ9UI33 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.66■□□□□ 0.74
SCN11AQ9UI33 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SCN11AQ9UI33 INE2-201ENST00000630399 1874 ntBASIC19.66■□□□□ 0.74
SCN11AQ9UI33 AC009093.2-202ENST00000620513 2079 ntBASIC19.65■□□□□ 0.74
SCN11AQ9UI33 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 AC138696.2-201ENST00000607376 223 ntBASIC19.65■□□□□ 0.74
SCN11AQ9UI33 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 DKFZP434H168-201ENST00000567381 1905 ntBASIC19.65■□□□□ 0.74
SCN11AQ9UI33 LINC02199-201ENST00000506655 2702 ntBASIC19.65■□□□□ 0.74
SCN11AQ9UI33 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 SERF2-209ENST00000409646 559 ntTSL 4 BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 AC010141.1-201ENST00000411585 623 ntBASIC19.65■□□□□ 0.74
SCN11AQ9UI33 SPTLC1P5-201ENST00000450718 252 ntBASIC19.65■□□□□ 0.74
SCN11AQ9UI33 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 AC002472.3-201ENST00000640124 621 ntBASIC19.65■□□□□ 0.74
SCN11AQ9UI33 KRT8P19-201ENST00000551916 1455 ntBASIC19.65■□□□□ 0.74
SCN11AQ9UI33 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SCN11AQ9UI33 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SCN11AQ9UI33 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.64■□□□□ 0.74
SCN11AQ9UI33 AL138725.1-201ENST00000407347 1314 ntBASIC19.64■□□□□ 0.74
SCN11AQ9UI33 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.64■□□□□ 0.73
SCN11AQ9UI33 AL365203.3-201ENST00000609742 2057 ntBASIC19.64■□□□□ 0.73
SCN11AQ9UI33 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms