Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 RARRES2P5-201ENST00000564013 466 ntBASIC13.01□□□□□ -0.33
GAFA1Q96PS6 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 AC036164.1-201ENST00000570544 333 ntBASIC13.01□□□□□ -0.33
GAFA1Q96PS6 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 AC004233.3-201ENST00000607794 1269 ntBASIC13.01□□□□□ -0.33
GAFA1Q96PS6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 CLK3P2-201ENST00000427566 1453 ntBASIC13.01□□□□□ -0.33
GAFA1Q96PS6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
GAFA1Q96PS6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
GAFA1Q96PS6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 HYMAI-201ENST00000635591 3347 ntBASIC13□□□□□ -0.33
GAFA1Q96PS6 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13□□□□□ -0.33
GAFA1Q96PS6 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13□□□□□ -0.33
GAFA1Q96PS6 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13□□□□□ -0.33
GAFA1Q96PS6 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13□□□□□ -0.33
GAFA1Q96PS6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
GAFA1Q96PS6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13□□□□□ -0.33
GAFA1Q96PS6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13□□□□□ -0.33
GAFA1Q96PS6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13□□□□□ -0.33
GAFA1Q96PS6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13□□□□□ -0.33
GAFA1Q96PS6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13□□□□□ -0.33
GAFA1Q96PS6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
GAFA1Q96PS6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13□□□□□ -0.33
GAFA1Q96PS6 MEP1AP4-201ENST00000423244 1087 ntBASIC13□□□□□ -0.33
GAFA1Q96PS6 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13□□□□□ -0.33
GAFA1Q96PS6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13□□□□□ -0.33
GAFA1Q96PS6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13□□□□□ -0.33
GAFA1Q96PS6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13□□□□□ -0.33
GAFA1Q96PS6 AC055876.2-201ENST00000531834 546 ntBASIC13□□□□□ -0.33
GAFA1Q96PS6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13□□□□□ -0.33
GAFA1Q96PS6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13□□□□□ -0.33
GAFA1Q96PS6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 AL132655.2-201ENST00000596276 594 ntBASIC13□□□□□ -0.33
GAFA1Q96PS6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13□□□□□ -0.33
GAFA1Q96PS6 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 AL162727.3-201ENST00000635661 2787 ntBASIC13□□□□□ -0.33
GAFA1Q96PS6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 AC073347.1-201ENST00000421633 2643 ntBASIC13□□□□□ -0.33
GAFA1Q96PS6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13□□□□□ -0.33
GAFA1Q96PS6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13□□□□□ -0.33
GAFA1Q96PS6 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
GAFA1Q96PS6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13□□□□□ -0.33
GAFA1Q96PS6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
GAFA1Q96PS6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 AC112693.3-201ENST00000624819 1983 ntBASIC13□□□□□ -0.33
GAFA1Q96PS6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
GAFA1Q96PS6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 AC022532.1-201ENST00000624563 1728 ntBASIC12.99□□□□□ -0.33
GAFA1Q96PS6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms