Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
USP9XQ93008 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
USP9XQ93008 AC022188.1-201ENST00000620960 1664 ntBASIC13.42□□□□□ -0.26
USP9XQ93008 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
USP9XQ93008 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
USP9XQ93008 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.42□□□□□ -0.26
USP9XQ93008 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
USP9XQ93008 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.42□□□□□ -0.26
USP9XQ93008 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.42□□□□□ -0.26
USP9XQ93008 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.42□□□□□ -0.26
USP9XQ93008 AP002803.1-201ENST00000528836 498 ntBASIC13.42□□□□□ -0.26
USP9XQ93008 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
USP9XQ93008 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.42□□□□□ -0.26
USP9XQ93008 AL031713.1-201ENST00000564813 661 ntBASIC13.42□□□□□ -0.26
USP9XQ93008 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.42□□□□□ -0.26
USP9XQ93008 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
USP9XQ93008 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.42□□□□□ -0.26
USP9XQ93008 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
USP9XQ93008 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.42□□□□□ -0.26
USP9XQ93008 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
USP9XQ93008 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
USP9XQ93008 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 AC092171.3-201ENST00000610122 2651 ntBASIC13.41□□□□□ -0.26
USP9XQ93008 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.41□□□□□ -0.26
USP9XQ93008 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.41□□□□□ -0.26
USP9XQ93008 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.41□□□□□ -0.26
USP9XQ93008 AL358472.3-201ENST00000608147 415 ntBASIC13.41□□□□□ -0.26
USP9XQ93008 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.41□□□□□ -0.26
USP9XQ93008 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
USP9XQ93008 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 AL157791.1-201ENST00000553667 1699 ntBASIC13.41□□□□□ -0.26
USP9XQ93008 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.41□□□□□ -0.26
USP9XQ93008 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.41□□□□□ -0.26
USP9XQ93008 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC13.41□□□□□ -0.26
USP9XQ93008 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC13.41□□□□□ -0.26
USP9XQ93008 HNRNPA1P42-201ENST00000458678 957 ntBASIC13.41□□□□□ -0.26
USP9XQ93008 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.41□□□□□ -0.26
USP9XQ93008 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC13.41□□□□□ -0.26
USP9XQ93008 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 AC005618.3-201ENST00000624928 458 ntBASIC13.41□□□□□ -0.26
USP9XQ93008 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
USP9XQ93008 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 FAM90A2P-201ENST00000511144 1395 ntBASIC13.41□□□□□ -0.26
USP9XQ93008 FAM90A25P-201ENST00000528404 1395 ntBASIC13.41□□□□□ -0.26
USP9XQ93008 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
USP9XQ93008 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.41□□□□□ -0.26
USP9XQ93008 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
USP9XQ93008 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.4□□□□□ -0.26
USP9XQ93008 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.4□□□□□ -0.26
USP9XQ93008 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
USP9XQ93008 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
USP9XQ93008 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.4□□□□□ -0.26
USP9XQ93008 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
USP9XQ93008 AC114812.1-204ENST00000449669 728 ntBASIC13.4□□□□□ -0.26
USP9XQ93008 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms