Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 MBLAC2-202ENST00000514906 1936 ntBASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 MIR566-201ENST00000385187 94 ntBASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 AL135901.1-201ENST00000451812 333 ntBASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 CMC2-224ENST00000630396 481 ntTSL 5 BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PRUNE2Q8WUY3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 NUDT4P2-201ENST00000578341 546 ntBASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 AL139339.2-201ENST00000608063 657 ntBASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 NHP2-202ENST00000314397 599 ntTSL 2 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 OR10B1P-201ENST00000601666 907 ntBASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRUNE2Q8WUY3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 HIST2H2BA-201ENST00000412169 381 ntBASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 AC114812.1-204ENST00000449669 728 ntBASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 AC006548.2-201ENST00000605217 529 ntBASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 CR392039.1-201ENST00000623217 204 ntBASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 AL136295.7-201ENST00000619226 1200 ntBASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.92■□□□□ 0.14
PRUNE2Q8WUY3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms