Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TSR1Q2NL82 AL691432.1-201ENST00000596308 1422 ntBASIC17.3■□□□□ 0.36
TSR1Q2NL82 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSR1Q2NL82 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TSR1Q2NL82 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
TSR1Q2NL82 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSR1Q2NL82 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.3■□□□□ 0.36
TSR1Q2NL82 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.3■□□□□ 0.36
TSR1Q2NL82 BCAR1-209ENST00000546196 1340 ntBASIC17.3■□□□□ 0.36
TSR1Q2NL82 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.3■□□□□ 0.36
TSR1Q2NL82 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.3■□□□□ 0.36
TSR1Q2NL82 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSR1Q2NL82 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSR1Q2NL82 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSR1Q2NL82 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.3■□□□□ 0.36
TSR1Q2NL82 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TSR1Q2NL82 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.3■□□□□ 0.36
TSR1Q2NL82 AC116407.3-201ENST00000623905 1129 ntBASIC17.3■□□□□ 0.36
TSR1Q2NL82 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TSR1Q2NL82 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TSR1Q2NL82 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSR1Q2NL82 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TSR1Q2NL82 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TSR1Q2NL82 LINC01101-201ENST00000622953 1884 ntBASIC17.3■□□□□ 0.36
TSR1Q2NL82 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSR1Q2NL82 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSR1Q2NL82 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
TSR1Q2NL82 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSR1Q2NL82 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TSR1Q2NL82 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TSR1Q2NL82 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSR1Q2NL82 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TSR1Q2NL82 AC025580.3-201ENST00000617932 1424 ntBASIC17.3■□□□□ 0.36
TSR1Q2NL82 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 RNA5SP415-201ENST00000517246 115 ntBASIC17.29■□□□□ 0.36
TSR1Q2NL82 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 AC087386.2-201ENST00000623212 4637 ntBASIC17.29■□□□□ 0.36
TSR1Q2NL82 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSR1Q2NL82 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TSR1Q2NL82 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSR1Q2NL82 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.28■□□□□ 0.36
TSR1Q2NL82 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSR1Q2NL82 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TSR1Q2NL82 AL009178.2-201ENST00000597278 2719 ntBASIC17.28■□□□□ 0.36
TSR1Q2NL82 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TSR1Q2NL82 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC17.28■□□□□ 0.36
TSR1Q2NL82 REXO1L1P-202ENST00000608646 1974 ntBASIC17.28■□□□□ 0.36
TSR1Q2NL82 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TSR1Q2NL82 AC126365.1-201ENST00000578585 1514 ntBASIC17.28■□□□□ 0.36
TSR1Q2NL82 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.28■□□□□ 0.36
TSR1Q2NL82 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.28■□□□□ 0.36
TSR1Q2NL82 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.28■□□□□ 0.36
TSR1Q2NL82 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.28■□□□□ 0.36
TSR1Q2NL82 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.28■□□□□ 0.36
TSR1Q2NL82 AP000347.1-202ENST00000435868 847 ntBASIC17.28■□□□□ 0.36
TSR1Q2NL82 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSR1Q2NL82 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.28■□□□□ 0.36
TSR1Q2NL82 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.28■□□□□ 0.36
TSR1Q2NL82 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.28■□□□□ 0.36
TSR1Q2NL82 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSR1Q2NL82 SPTSSB-204ENST00000617024 1292 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms