Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC21.92■■□□□ 1.1
CLTCL1P53675 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CLTCL1P53675 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLTCL1P53675 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CLTCL1P53675 AL391005.1-201ENST00000623953 2435 ntBASIC21.92■■□□□ 1.1
CLTCL1P53675 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLTCL1P53675 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLTCL1P53675 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC21.92■■□□□ 1.1
CLTCL1P53675 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC21.92■■□□□ 1.1
CLTCL1P53675 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLTCL1P53675 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLTCL1P53675 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLTCL1P53675 ACTG1P2-201ENST00000415776 1125 ntBASIC21.91■■□□□ 1.1
CLTCL1P53675 ACTG1P11-201ENST00000425411 1125 ntBASIC21.91■■□□□ 1.1
CLTCL1P53675 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLTCL1P53675 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC21.91■■□□□ 1.1
CLTCL1P53675 RN7SL574P-201ENST00000581512 297 ntBASIC21.91■■□□□ 1.1
CLTCL1P53675 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC21.91■■□□□ 1.1
CLTCL1P53675 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC21.91■■□□□ 1.1
CLTCL1P53675 AC009955.4-201ENST00000597192 544 ntBASIC21.91■■□□□ 1.1
CLTCL1P53675 AP001505.2-201ENST00000616815 443 ntBASIC21.91■■□□□ 1.1
CLTCL1P53675 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CLTCL1P53675 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLTCL1P53675 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC21.91■■□□□ 1.1
CLTCL1P53675 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CLTCL1P53675 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLTCL1P53675 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CLTCL1P53675 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CLTCL1P53675 AC011840.2-201ENST00000563063 1520 ntBASIC21.91■■□□□ 1.1
CLTCL1P53675 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLTCL1P53675 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLTCL1P53675 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLTCL1P53675 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC21.91■■□□□ 1.1
CLTCL1P53675 ZBTB45P1-201ENST00000452761 1456 ntBASIC21.91■■□□□ 1.1
CLTCL1P53675 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
CLTCL1P53675 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLTCL1P53675 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC21.91■■□□□ 1.1
CLTCL1P53675 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC21.91■■□□□ 1.1
CLTCL1P53675 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC21.91■■□□□ 1.1
CLTCL1P53675 AC026434.2-201ENST00000506094 1078 ntBASIC21.91■■□□□ 1.1
CLTCL1P53675 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC21.91■■□□□ 1.1
CLTCL1P53675 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLTCL1P53675 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLTCL1P53675 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC21.91■■□□□ 1.1
CLTCL1P53675 AC138696.2-201ENST00000607376 223 ntBASIC21.91■■□□□ 1.1
CLTCL1P53675 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC21.91■■□□□ 1.1
CLTCL1P53675 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC21.9■■□□□ 1.1
CLTCL1P53675 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLTCL1P53675 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
CLTCL1P53675 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC21.9■■□□□ 1.1
CLTCL1P53675 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLTCL1P53675 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLTCL1P53675 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLTCL1P53675 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CLTCL1P53675 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC21.9■■□□□ 1.1
CLTCL1P53675 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CLTCL1P53675 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC21.9■■□□□ 1.1
CLTCL1P53675 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLTCL1P53675 AC090616.6-203ENST00000579186 1945 ntBASIC21.9■■□□□ 1.1
CLTCL1P53675 AP005117.1-202ENST00000581724 1908 ntBASIC21.9■■□□□ 1.1
CLTCL1P53675 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLTCL1P53675 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLTCL1P53675 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CLTCL1P53675 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC21.9■■□□□ 1.1
CLTCL1P53675 FNTAP2-201ENST00000430308 634 ntBASIC21.9■■□□□ 1.1
CLTCL1P53675 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC21.9■■□□□ 1.1
CLTCL1P53675 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC21.9■■□□□ 1.1
CLTCL1P53675 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC21.9■■□□□ 1.1
CLTCL1P53675 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CLTCL1P53675 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC21.9■■□□□ 1.1
CLTCL1P53675 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLTCL1P53675 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLTCL1P53675 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLTCL1P53675 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLTCL1P53675 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC21.9■■□□□ 1.1
CLTCL1P53675 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC21.89■■□□□ 1.1
CLTCL1P53675 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
CLTCL1P53675 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLTCL1P53675 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.89■■□□□ 1.1
CLTCL1P53675 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CLTCL1P53675 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLTCL1P53675 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CLTCL1P53675 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLTCL1P53675 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLTCL1P53675 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLTCL1P53675 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLTCL1P53675 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CLTCL1P53675 IMP3P2-201ENST00000489760 475 ntBASIC21.89■■□□□ 1.09
CLTCL1P53675 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC21.89■■□□□ 1.09
CLTCL1P53675 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLTCL1P53675 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLTCL1P53675 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
CLTCL1P53675 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLTCL1P53675 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC21.89■■□□□ 1.09
CLTCL1P53675 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.09
CLTCL1P53675 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.89■■□□□ 1.09
CLTCL1P53675 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLTCL1P53675 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC21.89■■□□□ 1.09
CLTCL1P53675 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLTCL1P53675 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms