Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PDE6CP51160 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PDE6CP51160 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6CP51160 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PDE6CP51160 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6CP51160 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6CP51160 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.98■□□□□ 0.31
PDE6CP51160 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.98■□□□□ 0.31
PDE6CP51160 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PDE6CP51160 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.98■□□□□ 0.31
PDE6CP51160 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6CP51160 UGT1A2P-201ENST00000454886 866 ntBASIC16.98■□□□□ 0.31
PDE6CP51160 SERBP1P3-201ENST00000459980 809 ntBASIC16.98■□□□□ 0.31
PDE6CP51160 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6CP51160 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6CP51160 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6CP51160 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6CP51160 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.98■□□□□ 0.31
PDE6CP51160 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6CP51160 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6CP51160 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PDE6CP51160 AC027307.3-201ENST00000594262 1100 ntBASIC16.98■□□□□ 0.31
PDE6CP51160 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PDE6CP51160 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.98■□□□□ 0.31
PDE6CP51160 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PDE6CP51160 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6CP51160 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.98■□□□□ 0.31
PDE6CP51160 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.98■□□□□ 0.31
PDE6CP51160 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.98■□□□□ 0.31
PDE6CP51160 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PDE6CP51160 AC090616.6-203ENST00000579186 1945 ntBASIC16.98■□□□□ 0.31
PDE6CP51160 LINC02228-204ENST00000642115 2962 ntBASIC16.98■□□□□ 0.31
PDE6CP51160 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.97■□□□□ 0.31
PDE6CP51160 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.97■□□□□ 0.31
PDE6CP51160 AC013268.4-201ENST00000637413 2228 ntBASIC16.97■□□□□ 0.31
PDE6CP51160 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PDE6CP51160 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.97■□□□□ 0.31
PDE6CP51160 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.97■□□□□ 0.31
PDE6CP51160 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.97■□□□□ 0.31
PDE6CP51160 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PDE6CP51160 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PDE6CP51160 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.97■□□□□ 0.31
PDE6CP51160 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.97■□□□□ 0.31
PDE6CP51160 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.97■□□□□ 0.31
PDE6CP51160 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.97■□□□□ 0.31
PDE6CP51160 HNRNPUP1-201ENST00000554987 333 ntBASIC16.97■□□□□ 0.31
PDE6CP51160 AL079307.3-201ENST00000556114 283 ntBASIC16.97■□□□□ 0.31
PDE6CP51160 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.97■□□□□ 0.31
PDE6CP51160 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.97■□□□□ 0.31
PDE6CP51160 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PDE6CP51160 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.97■□□□□ 0.31
PDE6CP51160 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PDE6CP51160 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.97■□□□□ 0.31
PDE6CP51160 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.97■□□□□ 0.31
PDE6CP51160 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.97■□□□□ 0.31
PDE6CP51160 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.97■□□□□ 0.31
PDE6CP51160 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDE6CP51160 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms