Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMLP26374 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMLP26374 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMLP26374 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMLP26374 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMLP26374 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CHMLP26374 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMLP26374 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMLP26374 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.86■□□□□ 0.61
CHMLP26374 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.86■□□□□ 0.61
CHMLP26374 AC241585.1-201ENST00000433527 519 ntBASIC18.86■□□□□ 0.61
CHMLP26374 AC114501.2-201ENST00000439631 535 ntBASIC18.86■□□□□ 0.61
CHMLP26374 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.86■□□□□ 0.61
CHMLP26374 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMLP26374 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.86■□□□□ 0.61
CHMLP26374 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.86■□□□□ 0.61
CHMLP26374 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.86■□□□□ 0.61
CHMLP26374 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.86■□□□□ 0.61
CHMLP26374 AL390955.2-201ENST00000603032 514 ntBASIC18.86■□□□□ 0.61
CHMLP26374 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMLP26374 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CHMLP26374 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMLP26374 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMLP26374 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMLP26374 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHMLP26374 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.86■□□□□ 0.61
CHMLP26374 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMLP26374 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.86■□□□□ 0.61
CHMLP26374 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMLP26374 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHMLP26374 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
CHMLP26374 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
CHMLP26374 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.85■□□□□ 0.61
CHMLP26374 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.85■□□□□ 0.61
CHMLP26374 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.85■□□□□ 0.61
CHMLP26374 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMLP26374 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.85■□□□□ 0.61
CHMLP26374 AC055876.3-201ENST00000431496 288 ntBASIC18.85■□□□□ 0.61
CHMLP26374 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHMLP26374 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.85■□□□□ 0.61
CHMLP26374 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.85■□□□□ 0.61
CHMLP26374 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.85■□□□□ 0.61
CHMLP26374 AC138649.4-201ENST00000612222 287 ntBASIC18.85■□□□□ 0.61
CHMLP26374 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.85■□□□□ 0.61
CHMLP26374 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.85■□□□□ 0.61
CHMLP26374 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMLP26374 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CHMLP26374 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.85■□□□□ 0.61
CHMLP26374 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHMLP26374 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.84■□□□□ 0.61
CHMLP26374 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMLP26374 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMLP26374 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMLP26374 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMLP26374 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.84■□□□□ 0.61
CHMLP26374 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.84■□□□□ 0.61
CHMLP26374 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.84■□□□□ 0.61
CHMLP26374 AC092337.1-201ENST00000568699 1129 ntBASIC18.84■□□□□ 0.61
CHMLP26374 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CHMLP26374 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
CHMLP26374 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.84■□□□□ 0.61
CHMLP26374 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.84■□□□□ 0.61
CHMLP26374 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CHMLP26374 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.84■□□□□ 0.61
CHMLP26374 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHMLP26374 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms