Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 BNIP3P42-201ENST00000454982 569 ntBASIC17.54■□□□□ 0.4
GGPS1O95749 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.54■□□□□ 0.4
GGPS1O95749 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.54■□□□□ 0.4
GGPS1O95749 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.54■□□□□ 0.4
GGPS1O95749 BNIP3P29-201ENST00000598302 571 ntBASIC17.54■□□□□ 0.4
GGPS1O95749 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.54■□□□□ 0.4
GGPS1O95749 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.54■□□□□ 0.4
GGPS1O95749 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.54■□□□□ 0.4
GGPS1O95749 AC011447.5-201ENST00000616168 564 ntBASIC17.54■□□□□ 0.4
GGPS1O95749 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.54■□□□□ 0.4
GGPS1O95749 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
GGPS1O95749 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.54■□□□□ 0.4
GGPS1O95749 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GGPS1O95749 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GGPS1O95749 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
GGPS1O95749 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.53■□□□□ 0.4
GGPS1O95749 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
GGPS1O95749 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
GGPS1O95749 AP003680.1-201ENST00000598970 3660 ntBASIC17.53■□□□□ 0.4
GGPS1O95749 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.53■□□□□ 0.4
GGPS1O95749 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.53■□□□□ 0.4
GGPS1O95749 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.53■□□□□ 0.4
GGPS1O95749 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.53■□□□□ 0.4
GGPS1O95749 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.53■□□□□ 0.4
GGPS1O95749 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
GGPS1O95749 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.53■□□□□ 0.4
GGPS1O95749 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 AC093813.1-201ENST00000605066 256 ntBASIC17.53■□□□□ 0.4
GGPS1O95749 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 AL033527.4-201ENST00000641026 673 ntBASIC17.53■□□□□ 0.4
GGPS1O95749 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.53■□□□□ 0.4
GGPS1O95749 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.53■□□□□ 0.4
GGPS1O95749 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.53■□□□□ 0.4
GGPS1O95749 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GGPS1O95749 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.52■□□□□ 0.4
GGPS1O95749 AC093525.8-201ENST00000624099 1342 ntBASIC17.52■□□□□ 0.4
GGPS1O95749 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.52■□□□□ 0.4
GGPS1O95749 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
GGPS1O95749 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
GGPS1O95749 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.52■□□□□ 0.4
GGPS1O95749 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.52■□□□□ 0.4
GGPS1O95749 AC092933.1-201ENST00000393644 945 ntBASIC17.52■□□□□ 0.4
GGPS1O95749 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
GGPS1O95749 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
GGPS1O95749 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 AC106760.1-201ENST00000508690 800 ntBASIC17.52■□□□□ 0.4
GGPS1O95749 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.52■□□□□ 0.4
GGPS1O95749 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
GGPS1O95749 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.52■□□□□ 0.4
GGPS1O95749 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.52■□□□□ 0.4
GGPS1O95749 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.52■□□□□ 0.4
GGPS1O95749 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.52■□□□□ 0.4
GGPS1O95749 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.52■□□□□ 0.4
GGPS1O95749 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.52■□□□□ 0.4
GGPS1O95749 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.52■□□□□ 0.4
GGPS1O95749 MIR6799-201ENST00000620297 69 ntBASIC17.52■□□□□ 0.4
GGPS1O95749 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.52■□□□□ 0.4
GGPS1O95749 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
GGPS1O95749 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.52■□□□□ 0.4
GGPS1O95749 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
GGPS1O95749 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
GGPS1O95749 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms