Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXXC1Q9P0U4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CXXC1Q9P0U4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CXXC1Q9P0U4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CXXC1Q9P0U4 KRT8P29-201ENST00000420409 1371 ntBASIC16.62■□□□□ 0.25
CXXC1Q9P0U4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.62■□□□□ 0.25
CXXC1Q9P0U4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 AC234782.1-201ENST00000451950 919 ntBASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 RNMTL1P1-201ENST00000454103 560 ntBASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 AL161670.2-201ENST00000557650 1227 ntBASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CXXC1Q9P0U4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 AC018695.7-201ENST00000624587 2492 ntBASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 EIF3FP3-201ENST00000434851 1086 ntBASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 AC013355.1-201ENST00000562625 723 ntBASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 AC073352.2-201ENST00000609385 439 ntBASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 AC106886.4-201ENST00000623557 2502 ntBASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CXXC1Q9P0U4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 AC104073.2-201ENST00000453737 312 ntBASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.59■□□□□ 0.25
CXXC1Q9P0U4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms