Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 AC245100.5-201ENST00000452108 331 ntBASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 AC004890.2-204ENST00000481968 304 ntBASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 TERF1P3-201ENST00000505638 1227 ntBASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 AC138761.1-201ENST00000584393 385 ntBASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PCGF1Q9BSM1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 AC022144.1-201ENST00000602255 1580 ntBASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 AC002472.2-201ENST00000442739 958 ntBASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 MIR4321-201ENST00000592276 80 ntBASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 AL133215.2-201ENST00000609242 977 ntBASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
PCGF1Q9BSM1 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
PCGF1Q9BSM1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms