Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
RAB40CQ96S21 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RAB40CQ96S21 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 AC004870.1-201ENST00000315132 882 ntBASIC12.79□□□□□ -0.36
RAB40CQ96S21 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 AL513480.1-201ENST00000451731 511 ntBASIC12.79□□□□□ -0.36
RAB40CQ96S21 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 OR7E14P-202ENST00000530490 1290 ntBASIC12.79□□□□□ -0.36
RAB40CQ96S21 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 OR7E47P-204ENST00000575924 449 ntBASIC12.79□□□□□ -0.36
RAB40CQ96S21 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 AL691432.3-201ENST00000621860 400 ntBASIC12.79□□□□□ -0.36
RAB40CQ96S21 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 REXO1L1P-202ENST00000608646 1974 ntBASIC12.79□□□□□ -0.36
RAB40CQ96S21 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 WASH3P-207ENST00000560956 1394 ntBASIC12.79□□□□□ -0.36
RAB40CQ96S21 FO538757.1-201ENST00000623083 1397 ntBASIC12.79□□□□□ -0.36
RAB40CQ96S21 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RAB40CQ96S21 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
RAB40CQ96S21 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 AC073648.2-201ENST00000510116 352 ntBASIC12.78□□□□□ -0.36
RAB40CQ96S21 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 RN7SL510P-201ENST00000581311 263 ntBASIC12.78□□□□□ -0.36
RAB40CQ96S21 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 AL121912.1-201ENST00000603683 238 ntBASIC12.78□□□□□ -0.36
RAB40CQ96S21 AC005593.1-201ENST00000624894 515 ntBASIC12.78□□□□□ -0.36
RAB40CQ96S21 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB40CQ96S21 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB40CQ96S21 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms