Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 AL662890.1-201ENST00000396818 632 ntBASIC16.93■□□□□ 0.3
HERC6Q8IVU3 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 BX284668.4-201ENST00000453917 508 ntBASIC16.93■□□□□ 0.3
HERC6Q8IVU3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 AC020914.3-201ENST00000594712 304 ntBASIC16.93■□□□□ 0.3
HERC6Q8IVU3 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.93■□□□□ 0.3
HERC6Q8IVU3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 REXO1L1P-202ENST00000608646 1974 ntBASIC16.92■□□□□ 0.3
HERC6Q8IVU3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 HOMER2P2-201ENST00000451621 847 ntBASIC16.92■□□□□ 0.3
HERC6Q8IVU3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 RPSAP36-202ENST00000494591 1261 ntBASIC16.92■□□□□ 0.3
HERC6Q8IVU3 KRT18P25-201ENST00000508931 1278 ntBASIC16.92■□□□□ 0.3
HERC6Q8IVU3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 AC105129.2-201ENST00000559536 390 ntBASIC16.92■□□□□ 0.3
HERC6Q8IVU3 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 AP005019.2-201ENST00000615104 511 ntBASIC16.92■□□□□ 0.3
HERC6Q8IVU3 AC145423.3-201ENST00000615987 467 ntBASIC16.92■□□□□ 0.3
HERC6Q8IVU3 AC132938.4-201ENST00000623835 848 ntBASIC16.92■□□□□ 0.3
HERC6Q8IVU3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 AP001282.1-201ENST00000531301 1499 ntBASIC16.92■□□□□ 0.3
HERC6Q8IVU3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERC6Q8IVU3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms