Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 RN7SL818P-201ENST00000485099 259 ntBASIC10.69□□□□□ -0.7
CSMD3Q7Z407 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 RN7SL725P-201ENST00000606439 259 ntBASIC10.69□□□□□ -0.7
CSMD3Q7Z407 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 AL157414.3-201ENST00000624276 1954 ntBASIC10.69□□□□□ -0.7
CSMD3Q7Z407 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 AC007787.1-201ENST00000588095 1583 ntBASIC10.69□□□□□ -0.7
CSMD3Q7Z407 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 MIR4754-201ENST00000582477 89 ntBASIC10.69□□□□□ -0.7
CSMD3Q7Z407 DIO1-215ENST00000610607 796 ntTSL 5 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 AP001002.3-201ENST00000623482 206 ntBASIC10.69□□□□□ -0.7
CSMD3Q7Z407 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 FGFR3P1-201ENST00000449999 601 ntBASIC10.69□□□□□ -0.7
CSMD3Q7Z407 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 AC242376.1-201ENST00000559033 726 ntBASIC10.69□□□□□ -0.7
CSMD3Q7Z407 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CSMD3Q7Z407 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 CHMP1AP1-201ENST00000445563 662 ntBASIC10.68□□□□□ -0.7
CSMD3Q7Z407 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 TMCO5B-205ENST00000530020 894 ntBASIC10.68□□□□□ -0.7
CSMD3Q7Z407 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 AL450472.2-201ENST00000603663 1156 ntBASIC10.68□□□□□ -0.7
CSMD3Q7Z407 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 TKT-202ENST00000423516 2075 ntTSL 2 BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 AC136759.1-202ENST00000530858 2194 ntBASIC10.68□□□□□ -0.7
CSMD3Q7Z407 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 CAP2P1-201ENST00000557743 1390 ntBASIC10.68□□□□□ -0.7
CSMD3Q7Z407 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 POM121L8P-201ENST00000417732 1281 ntBASIC10.68□□□□□ -0.7
CSMD3Q7Z407 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 POM121L9P-203ENST00000441984 1285 ntBASIC10.68□□□□□ -0.7
CSMD3Q7Z407 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 AC051619.9-201ENST00000623237 597 ntBASIC10.68□□□□□ -0.7
CSMD3Q7Z407 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CSMD3Q7Z407 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC10.67□□□□□ -0.7
CSMD3Q7Z407 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CSMD3Q7Z407 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CSMD3Q7Z407 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CSMD3Q7Z407 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
CSMD3Q7Z407 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC10.67□□□□□ -0.7
CSMD3Q7Z407 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CSMD3Q7Z407 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms