Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 AC244157.2-201ENST00000616239 1006 ntBASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 ENPP7P14-201ENST00000621765 1040 ntBASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 AC138627.1-207ENST00000641560 1006 ntBASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD4Q5XG99 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 MIR4313-201ENST00000580760 101 ntBASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 AC025181.2-201ENST00000606994 802 ntBASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 AC007663.3-201ENST00000609632 465 ntBASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 AC138649.2-201ENST00000615886 705 ntBASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 AC148477.4-201ENST00000613430 1793 ntBASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD4Q5XG99 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 FAM8A4P-201ENST00000435433 1213 ntBASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 MIR3619-201ENST00000579667 83 ntBASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LYSMD4Q5XG99 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LYSMD4Q5XG99 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms