Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.3■□□□□ 0.04
AP1S2P56377 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 RPL13P2-201ENST00000440687 659 ntBASIC15.3■□□□□ 0.04
AP1S2P56377 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.3■□□□□ 0.04
AP1S2P56377 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.3■□□□□ 0.04
AP1S2P56377 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.3■□□□□ 0.04
AP1S2P56377 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.3■□□□□ 0.04
AP1S2P56377 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.3■□□□□ 0.04
AP1S2P56377 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.3■□□□□ 0.04
AP1S2P56377 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.3■□□□□ 0.04
AP1S2P56377 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.3■□□□□ 0.04
AP1S2P56377 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
AP1S2P56377 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.3■□□□□ 0.04
AP1S2P56377 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
AP1S2P56377 GPALPP1-207ENST00000611650 899 ntBASIC15.3■□□□□ 0.04
AP1S2P56377 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP1S2P56377 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.29■□□□□ 0.04
AP1S2P56377 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S2P56377 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.29■□□□□ 0.04
AP1S2P56377 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.29■□□□□ 0.04
AP1S2P56377 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP1S2P56377 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.29■□□□□ 0.04
AP1S2P56377 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.29■□□□□ 0.04
AP1S2P56377 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
AP1S2P56377 AC126755.1-201ENST00000525846 6405 ntBASIC15.29■□□□□ 0.04
AP1S2P56377 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.29■□□□□ 0.04
AP1S2P56377 AC112693.3-201ENST00000624819 1983 ntBASIC15.29■□□□□ 0.04
AP1S2P56377 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.29■□□□□ 0.04
AP1S2P56377 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP1S2P56377 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S2P56377 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S2P56377 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
AP1S2P56377 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
AP1S2P56377 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S2P56377 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S2P56377 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
AP1S2P56377 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S2P56377 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S2P56377 AC100757.3-201ENST00000622361 1406 ntBASIC15.29■□□□□ 0.04
AP1S2P56377 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S2P56377 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S2P56377 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
AP1S2P56377 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.29■□□□□ 0.04
AP1S2P56377 TREML5P-201ENST00000421694 576 ntBASIC15.29■□□□□ 0.04
AP1S2P56377 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
AP1S2P56377 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.29■□□□□ 0.04
AP1S2P56377 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.29■□□□□ 0.04
AP1S2P56377 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S2P56377 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.29■□□□□ 0.04
AP1S2P56377 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.29■□□□□ 0.04
AP1S2P56377 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
AP1S2P56377 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
AP1S2P56377 NORAD-201ENST00000565493 5339 ntBASIC15.29■□□□□ 0.04
AP1S2P56377 AL109954.1-202ENST00000564051 2148 ntBASIC15.29■□□□□ 0.04
AP1S2P56377 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
AP1S2P56377 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S2P56377 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S2P56377 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.29■□□□□ 0.04
AP1S2P56377 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.29■□□□□ 0.04
AP1S2P56377 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
AP1S2P56377 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
AP1S2P56377 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S2P56377 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S2P56377 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S2P56377 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S2P56377 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.28■□□□□ 0.04
AP1S2P56377 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S2P56377 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S2P56377 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S2P56377 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S2P56377 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.28■□□□□ 0.04
AP1S2P56377 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S2P56377 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
AP1S2P56377 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S2P56377 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S2P56377 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S2P56377 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.28■□□□□ 0.04
AP1S2P56377 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S2P56377 AL133267.1-201ENST00000398220 340 ntBASIC15.28■□□□□ 0.04
AP1S2P56377 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.28■□□□□ 0.04
AP1S2P56377 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.28■□□□□ 0.04
AP1S2P56377 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.28■□□□□ 0.04
AP1S2P56377 AC241585.1-201ENST00000433527 519 ntBASIC15.28■□□□□ 0.04
AP1S2P56377 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
AP1S2P56377 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.28■□□□□ 0.04
AP1S2P56377 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.28■□□□□ 0.04
AP1S2P56377 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.28■□□□□ 0.04
AP1S2P56377 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.28■□□□□ 0.04
AP1S2P56377 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms