Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CLTCL1P53675 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CLTCL1P53675 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLTCL1P53675 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLTCL1P53675 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLTCL1P53675 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC21.95■■□□□ 1.1
CLTCL1P53675 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CLTCL1P53675 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CLTCL1P53675 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC21.95■■□□□ 1.1
CLTCL1P53675 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC21.95■■□□□ 1.1
CLTCL1P53675 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC21.95■■□□□ 1.1
CLTCL1P53675 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLTCL1P53675 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC21.95■■□□□ 1.1
CLTCL1P53675 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CLTCL1P53675 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLTCL1P53675 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLTCL1P53675 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC21.95■■□□□ 1.1
CLTCL1P53675 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC21.95■■□□□ 1.1
CLTCL1P53675 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC21.95■■□□□ 1.1
CLTCL1P53675 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC21.95■■□□□ 1.1
CLTCL1P53675 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC21.95■■□□□ 1.1
CLTCL1P53675 AL645939.5-201ENST00000606834 243 ntBASIC21.95■■□□□ 1.1
CLTCL1P53675 AC007663.3-201ENST00000609632 465 ntBASIC21.95■■□□□ 1.1
CLTCL1P53675 AP000593.2-201ENST00000542775 1433 ntBASIC21.95■■□□□ 1.1
CLTCL1P53675 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CLTCL1P53675 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLTCL1P53675 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLTCL1P53675 REXO1L5P-201ENST00000622260 2098 ntBASIC21.94■■□□□ 1.1
CLTCL1P53675 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC21.94■■□□□ 1.1
CLTCL1P53675 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLTCL1P53675 AL118508.1-201ENST00000613502 2345 ntBASIC21.94■■□□□ 1.1
CLTCL1P53675 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLTCL1P53675 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLTCL1P53675 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC21.94■■□□□ 1.1
CLTCL1P53675 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC21.94■■□□□ 1.1
CLTCL1P53675 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLTCL1P53675 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
CLTCL1P53675 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CLTCL1P53675 MDH2-205ENST00000461263 648 ntTSL 2 BASIC21.94■■□□□ 1.1
CLTCL1P53675 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC21.94■■□□□ 1.1
CLTCL1P53675 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC21.94■■□□□ 1.1
CLTCL1P53675 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC21.94■■□□□ 1.1
CLTCL1P53675 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC21.94■■□□□ 1.1
CLTCL1P53675 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLTCL1P53675 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLTCL1P53675 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLTCL1P53675 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLTCL1P53675 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CLTCL1P53675 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLTCL1P53675 LINC02199-201ENST00000506655 2702 ntBASIC21.94■■□□□ 1.1
CLTCL1P53675 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CLTCL1P53675 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLTCL1P53675 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLTCL1P53675 AL513523.2-202ENST00000427283 2040 ntBASIC21.93■■□□□ 1.1
CLTCL1P53675 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLTCL1P53675 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLTCL1P53675 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CLTCL1P53675 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC21.93■■□□□ 1.1
CLTCL1P53675 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC21.93■■□□□ 1.1
CLTCL1P53675 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC21.93■■□□□ 1.1
CLTCL1P53675 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC21.93■■□□□ 1.1
CLTCL1P53675 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLTCL1P53675 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CLTCL1P53675 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLTCL1P53675 AC009093.2-202ENST00000620513 2079 ntBASIC21.93■■□□□ 1.1
CLTCL1P53675 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLTCL1P53675 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC21.93■■□□□ 1.1
CLTCL1P53675 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLTCL1P53675 SPTLC1P5-201ENST00000450718 252 ntBASIC21.93■■□□□ 1.1
CLTCL1P53675 EIF4HP1-201ENST00000453115 687 ntBASIC21.93■■□□□ 1.1
CLTCL1P53675 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC21.93■■□□□ 1.1
CLTCL1P53675 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC21.93■■□□□ 1.1
CLTCL1P53675 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC21.93■■□□□ 1.1
CLTCL1P53675 MIR3619-201ENST00000579667 83 ntBASIC21.93■■□□□ 1.1
CLTCL1P53675 AC106872.11-201ENST00000605838 421 ntBASIC21.93■■□□□ 1.1
CLTCL1P53675 AC091812.3-201ENST00000621362 345 ntBASIC21.93■■□□□ 1.1
CLTCL1P53675 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLTCL1P53675 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
CLTCL1P53675 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CLTCL1P53675 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLTCL1P53675 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLTCL1P53675 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC21.93■■□□□ 1.1
CLTCL1P53675 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLTCL1P53675 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLTCL1P53675 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLTCL1P53675 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLTCL1P53675 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLTCL1P53675 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.92■■□□□ 1.1
CLTCL1P53675 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC21.92■■□□□ 1.1
CLTCL1P53675 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CLTCL1P53675 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLTCL1P53675 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC21.92■■□□□ 1.1
CLTCL1P53675 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC21.92■■□□□ 1.1
CLTCL1P53675 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLTCL1P53675 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLTCL1P53675 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC21.92■■□□□ 1.1
CLTCL1P53675 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLTCL1P53675 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLTCL1P53675 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
CLTCL1P53675 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms