Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
MTHFRP42898 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.39■□□□□ 0.21
MTHFRP42898 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.39■□□□□ 0.21
MTHFRP42898 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.39■□□□□ 0.21
MTHFRP42898 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.39■□□□□ 0.21
MTHFRP42898 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.39■□□□□ 0.21
MTHFRP42898 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.39■□□□□ 0.21
MTHFRP42898 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.39■□□□□ 0.21
MTHFRP42898 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.39■□□□□ 0.21
MTHFRP42898 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.39■□□□□ 0.21
MTHFRP42898 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.39■□□□□ 0.21
MTHFRP42898 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.39■□□□□ 0.21
MTHFRP42898 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.39■□□□□ 0.21
MTHFRP42898 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.39■□□□□ 0.21
MTHFRP42898 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
MTHFRP42898 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
MTHFRP42898 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.39■□□□□ 0.21
MTHFRP42898 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MTHFRP42898 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
MTHFRP42898 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.38■□□□□ 0.21
MTHFRP42898 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.38■□□□□ 0.21
MTHFRP42898 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.38■□□□□ 0.21
MTHFRP42898 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 AC079328.2-201ENST00000561241 3354 ntBASIC16.38■□□□□ 0.21
MTHFRP42898 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MTHFRP42898 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.38■□□□□ 0.21
MTHFRP42898 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.38■□□□□ 0.21
MTHFRP42898 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.38■□□□□ 0.21
MTHFRP42898 DRD5P1-201ENST00000456605 1438 ntBASIC16.38■□□□□ 0.21
MTHFRP42898 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.38■□□□□ 0.21
MTHFRP42898 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
MTHFRP42898 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MTHFRP42898 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.38■□□□□ 0.21
MTHFRP42898 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MTHFRP42898 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MTHFRP42898 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
MTHFRP42898 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.38■□□□□ 0.21
MTHFRP42898 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.38■□□□□ 0.21
MTHFRP42898 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC16.38■□□□□ 0.21
MTHFRP42898 AP001582.1-201ENST00000525856 295 ntBASIC16.38■□□□□ 0.21
MTHFRP42898 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.38■□□□□ 0.21
MTHFRP42898 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.38■□□□□ 0.21
MTHFRP42898 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.38■□□□□ 0.21
MTHFRP42898 AL008638.5-201ENST00000623814 1298 ntBASIC16.38■□□□□ 0.21
MTHFRP42898 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
MTHFRP42898 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
MTHFRP42898 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.38■□□□□ 0.21
MTHFRP42898 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MTHFRP42898 AHCYP2-201ENST00000430630 1300 ntBASIC16.38■□□□□ 0.21
MTHFRP42898 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.38■□□□□ 0.21
MTHFRP42898 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.38■□□□□ 0.21
MTHFRP42898 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.38■□□□□ 0.21
MTHFRP42898 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MTHFRP42898 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.37■□□□□ 0.21
MTHFRP42898 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.37■□□□□ 0.21
MTHFRP42898 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.37■□□□□ 0.21
MTHFRP42898 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.37■□□□□ 0.21
MTHFRP42898 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
MTHFRP42898 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
MTHFRP42898 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.37■□□□□ 0.21
MTHFRP42898 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
MTHFRP42898 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms