Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
HADHAP40939 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.94■□□□□ 0.14
HADHAP40939 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HADHAP40939 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HADHAP40939 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HADHAP40939 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
HADHAP40939 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.94■□□□□ 0.14
HADHAP40939 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.94■□□□□ 0.14
HADHAP40939 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.94■□□□□ 0.14
HADHAP40939 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HADHAP40939 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
HADHAP40939 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
HADHAP40939 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.93■□□□□ 0.14
HADHAP40939 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HADHAP40939 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.93■□□□□ 0.14
HADHAP40939 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.93■□□□□ 0.14
HADHAP40939 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.93■□□□□ 0.14
HADHAP40939 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 AL645939.2-201ENST00000427340 991 ntBASIC15.93■□□□□ 0.14
HADHAP40939 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
HADHAP40939 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.93■□□□□ 0.14
HADHAP40939 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.93■□□□□ 0.14
HADHAP40939 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.93■□□□□ 0.14
HADHAP40939 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.93■□□□□ 0.14
HADHAP40939 AC125807.1-201ENST00000483097 614 ntBASIC15.93■□□□□ 0.14
HADHAP40939 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.93■□□□□ 0.14
HADHAP40939 AL079307.3-201ENST00000556114 283 ntBASIC15.93■□□□□ 0.14
HADHAP40939 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.93■□□□□ 0.14
HADHAP40939 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.93■□□□□ 0.14
HADHAP40939 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.93■□□□□ 0.14
HADHAP40939 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.93■□□□□ 0.14
HADHAP40939 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.93■□□□□ 0.14
HADHAP40939 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HADHAP40939 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
HADHAP40939 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.93■□□□□ 0.14
HADHAP40939 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.93■□□□□ 0.14
HADHAP40939 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.93■□□□□ 0.14
HADHAP40939 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.93■□□□□ 0.14
HADHAP40939 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HADHAP40939 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.93■□□□□ 0.14
HADHAP40939 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.92■□□□□ 0.14
HADHAP40939 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.92■□□□□ 0.14
HADHAP40939 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.92■□□□□ 0.14
HADHAP40939 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.92■□□□□ 0.14
HADHAP40939 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.92■□□□□ 0.14
HADHAP40939 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HADHAP40939 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HADHAP40939 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.92■□□□□ 0.14
HADHAP40939 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HADHAP40939 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.92■□□□□ 0.14
HADHAP40939 FAM86GP-201ENST00000448322 971 ntBASIC15.92■□□□□ 0.14
HADHAP40939 KLF2P3-201ENST00000451977 1087 ntBASIC15.92■□□□□ 0.14
HADHAP40939 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 SERBP1P3-201ENST00000459980 809 ntBASIC15.92■□□□□ 0.14
HADHAP40939 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.92■□□□□ 0.14
HADHAP40939 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HADHAP40939 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.92■□□□□ 0.14
HADHAP40939 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.92■□□□□ 0.14
HADHAP40939 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.92■□□□□ 0.14
HADHAP40939 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.92■□□□□ 0.14
HADHAP40939 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.92■□□□□ 0.14
HADHAP40939 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HADHAP40939 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms