Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
COL15A1P39059 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.64■□□□□ 0.73
COL15A1P39059 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL15A1P39059 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL15A1P39059 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL15A1P39059 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.64■□□□□ 0.73
COL15A1P39059 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
COL15A1P39059 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
COL15A1P39059 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.64■□□□□ 0.73
COL15A1P39059 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.64■□□□□ 0.73
COL15A1P39059 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
COL15A1P39059 BX284668.4-201ENST00000453917 508 ntBASIC19.64■□□□□ 0.73
COL15A1P39059 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.64■□□□□ 0.73
COL15A1P39059 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC19.64■□□□□ 0.73
COL15A1P39059 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.64■□□□□ 0.73
COL15A1P39059 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
COL15A1P39059 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL15A1P39059 AC020914.3-201ENST00000594712 304 ntBASIC19.64■□□□□ 0.73
COL15A1P39059 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.64■□□□□ 0.73
COL15A1P39059 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.64■□□□□ 0.73
COL15A1P39059 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC19.64■□□□□ 0.73
COL15A1P39059 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
COL15A1P39059 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
COL15A1P39059 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL15A1P39059 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL15A1P39059 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
COL15A1P39059 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL15A1P39059 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL15A1P39059 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL15A1P39059 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL15A1P39059 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL15A1P39059 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
COL15A1P39059 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL15A1P39059 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
COL15A1P39059 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL15A1P39059 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL15A1P39059 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL15A1P39059 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL15A1P39059 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL15A1P39059 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL15A1P39059 DOC2GP-204ENST00000639052 2548 ntBASIC19.63■□□□□ 0.73
COL15A1P39059 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
COL15A1P39059 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL15A1P39059 LINC02199-201ENST00000506655 2702 ntBASIC19.63■□□□□ 0.73
COL15A1P39059 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL15A1P39059 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COL15A1P39059 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
COL15A1P39059 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL15A1P39059 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.63■□□□□ 0.73
COL15A1P39059 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.63■□□□□ 0.73
COL15A1P39059 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.63■□□□□ 0.73
COL15A1P39059 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL15A1P39059 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC19.63■□□□□ 0.73
COL15A1P39059 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
COL15A1P39059 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC19.63■□□□□ 0.73
COL15A1P39059 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.63■□□□□ 0.73
COL15A1P39059 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.63■□□□□ 0.73
COL15A1P39059 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
COL15A1P39059 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL15A1P39059 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.63■□□□□ 0.73
COL15A1P39059 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL15A1P39059 SUPT20HL2-201ENST00000486479 2409 ntBASIC19.63■□□□□ 0.73
COL15A1P39059 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
COL15A1P39059 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
COL15A1P39059 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COL15A1P39059 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.62■□□□□ 0.73
COL15A1P39059 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.62■□□□□ 0.73
COL15A1P39059 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
COL15A1P39059 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
COL15A1P39059 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC19.62■□□□□ 0.73
COL15A1P39059 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.62■□□□□ 0.73
COL15A1P39059 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC19.62■□□□□ 0.73
COL15A1P39059 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 AC025181.2-201ENST00000606994 802 ntBASIC19.62■□□□□ 0.73
COL15A1P39059 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.62■□□□□ 0.73
COL15A1P39059 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
COL15A1P39059 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.62■□□□□ 0.73
COL15A1P39059 HCG11-201ENST00000411553 5696 ntBASIC19.62■□□□□ 0.73
COL15A1P39059 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
COL15A1P39059 AL023775.1-201ENST00000454907 1746 ntBASIC19.62■□□□□ 0.73
COL15A1P39059 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.62■□□□□ 0.73
COL15A1P39059 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL15A1P39059 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC19.61■□□□□ 0.73
COL15A1P39059 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.61■□□□□ 0.73
COL15A1P39059 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms