Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.51□□□□□ -0.25
CCL1P22362 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CCL1P22362 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL1P22362 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CCL1P22362 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CCL1P22362 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CCL1P22362 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CCL1P22362 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CCL1P22362 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.5□□□□□ -0.25
CCL1P22362 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CCL1P22362 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 AL133267.1-201ENST00000398220 340 ntBASIC13.5□□□□□ -0.25
CCL1P22362 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL1P22362 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL1P22362 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.5□□□□□ -0.25
CCL1P22362 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.5□□□□□ -0.25
CCL1P22362 SERBP1P3-201ENST00000459980 809 ntBASIC13.5□□□□□ -0.25
CCL1P22362 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.5□□□□□ -0.25
CCL1P22362 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.5□□□□□ -0.25
CCL1P22362 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CCL1P22362 MIR3687-2-201ENST00000577708 61 ntBASIC13.5□□□□□ -0.25
CCL1P22362 MIR4453-201ENST00000584019 89 ntBASIC13.5□□□□□ -0.25
CCL1P22362 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.5□□□□□ -0.25
CCL1P22362 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.5□□□□□ -0.25
CCL1P22362 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.5□□□□□ -0.25
CCL1P22362 MIR3687-1-201ENST00000614492 61 ntBASIC13.5□□□□□ -0.25
CCL1P22362 AL645728.2-202ENST00000641679 227 ntBASIC13.5□□□□□ -0.25
CCL1P22362 LINC02228-204ENST00000642115 2962 ntBASIC13.5□□□□□ -0.25
CCL1P22362 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CCL1P22362 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CCL1P22362 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CCL1P22362 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 AJ011931.1-201ENST00000618749 2492 ntBASIC13.5□□□□□ -0.25
CCL1P22362 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.5□□□□□ -0.25
CCL1P22362 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.5□□□□□ -0.25
CCL1P22362 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCL1P22362 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CCL1P22362 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.49□□□□□ -0.25
CCL1P22362 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.49□□□□□ -0.25
CCL1P22362 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.49□□□□□ -0.25
CCL1P22362 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.49□□□□□ -0.25
CCL1P22362 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
CCL1P22362 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CCL1P22362 RPSAP43-201ENST00000402237 625 ntBASIC13.49□□□□□ -0.25
CCL1P22362 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.49□□□□□ -0.25
CCL1P22362 AC112482.1-201ENST00000492080 688 ntBASIC13.49□□□□□ -0.25
CCL1P22362 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.49□□□□□ -0.25
CCL1P22362 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.49□□□□□ -0.25
CCL1P22362 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.49□□□□□ -0.25
CCL1P22362 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.49□□□□□ -0.25
CCL1P22362 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.49□□□□□ -0.25
CCL1P22362 AC025048.3-201ENST00000590609 569 ntBASIC13.49□□□□□ -0.25
CCL1P22362 AC005702.4-201ENST00000618393 416 ntBASIC13.49□□□□□ -0.25
CCL1P22362 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.49□□□□□ -0.25
CCL1P22362 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 CETN4P-206ENST00000642099 2168 ntBASIC13.49□□□□□ -0.25
CCL1P22362 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
CCL1P22362 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CCL1P22362 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms