Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPRFP10586 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC17.62■□□□□ 0.41
PTPRFP10586 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPRFP10586 MIR3907-201ENST00000579424 151 ntBASIC17.62■□□□□ 0.41
PTPRFP10586 AC009955.4-201ENST00000597192 544 ntBASIC17.62■□□□□ 0.41
PTPRFP10586 AC079336.7-201ENST00000623428 1078 ntBASIC17.62■□□□□ 0.41
PTPRFP10586 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 AC004899.1-201ENST00000424687 1714 ntBASIC17.62■□□□□ 0.41
PTPRFP10586 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPRFP10586 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPRFP10586 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPRFP10586 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PTPRFP10586 AC127383.1-201ENST00000444697 1800 ntBASIC17.62■□□□□ 0.41
PTPRFP10586 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPRFP10586 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
PTPRFP10586 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPRFP10586 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PTPRFP10586 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPRFP10586 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 AC106794.1-201ENST00000506935 792 ntBASIC17.62■□□□□ 0.41
PTPRFP10586 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PTPRFP10586 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.62■□□□□ 0.41
PTPRFP10586 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.62■□□□□ 0.41
PTPRFP10586 MIR4722-201ENST00000578292 60 ntBASIC17.62■□□□□ 0.41
PTPRFP10586 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.62■□□□□ 0.41
PTPRFP10586 AC132192.2-201ENST00000596206 1147 ntBASIC17.62■□□□□ 0.41
PTPRFP10586 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PTPRFP10586 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.62■□□□□ 0.41
PTPRFP10586 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PTPRFP10586 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTPRFP10586 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
PTPRFP10586 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.61■□□□□ 0.41
PTPRFP10586 AC084018.2-201ENST00000613093 2607 ntBASIC17.61■□□□□ 0.41
PTPRFP10586 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPRFP10586 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPRFP10586 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 AP000593.2-201ENST00000542775 1433 ntBASIC17.61■□□□□ 0.41
PTPRFP10586 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPRFP10586 RN7SL720P-201ENST00000488178 304 ntBASIC17.61■□□□□ 0.41
PTPRFP10586 AC103988.2-201ENST00000561804 725 ntBASIC17.61■□□□□ 0.41
PTPRFP10586 AC005324.6-201ENST00000587972 613 ntBASIC17.61■□□□□ 0.41
PTPRFP10586 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.61■□□□□ 0.41
PTPRFP10586 BNIP3P13-201ENST00000599968 566 ntBASIC17.61■□□□□ 0.41
PTPRFP10586 AL023803.2-201ENST00000620080 638 ntBASIC17.61■□□□□ 0.41
PTPRFP10586 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PTPRFP10586 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPRFP10586 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PTPRFP10586 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 AC020763.4-201ENST00000623414 4170 ntBASIC17.61■□□□□ 0.41
PTPRFP10586 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PTPRFP10586 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.61■□□□□ 0.41
PTPRFP10586 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTPRFP10586 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.61■□□□□ 0.41
PTPRFP10586 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPRFP10586 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPRFP10586 RPL5P21-201ENST00000404620 815 ntBASIC17.6■□□□□ 0.41
PTPRFP10586 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPRFP10586 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPRFP10586 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPRFP10586 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.6■□□□□ 0.41
PTPRFP10586 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPRFP10586 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.6■□□□□ 0.41
PTPRFP10586 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPRFP10586 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPRFP10586 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTPRFP10586 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PTPRFP10586 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PTPRFP10586 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.6■□□□□ 0.41
PTPRFP10586 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.6■□□□□ 0.41
PTPRFP10586 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms