Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.1□□□□□ -0.15
TVP23AA6NH52 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
TVP23AA6NH52 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.1□□□□□ -0.15
TVP23AA6NH52 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TVP23AA6NH52 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.1□□□□□ -0.15
TVP23AA6NH52 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
TVP23AA6NH52 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.1□□□□□ -0.15
TVP23AA6NH52 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.1□□□□□ -0.15
TVP23AA6NH52 OR2I1P-210ENST00000642037 4691 ntBASIC14.1□□□□□ -0.15
TVP23AA6NH52 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TVP23AA6NH52 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TVP23AA6NH52 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 AP3S2-216ENST00000617003 1561 ntBASIC14.09□□□□□ -0.15
TVP23AA6NH52 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 TCAF2P1-201ENST00000291129 2421 ntBASIC14.09□□□□□ -0.15
TVP23AA6NH52 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 AL592309.1-201ENST00000443127 649 ntBASIC14.09□□□□□ -0.15
TVP23AA6NH52 ALG1L5P-201ENST00000482043 771 ntBASIC14.09□□□□□ -0.15
TVP23AA6NH52 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.09□□□□□ -0.15
TVP23AA6NH52 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TVP23AA6NH52 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TVP23AA6NH52 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TVP23AA6NH52 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TVP23AA6NH52 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.08□□□□□ -0.15
TVP23AA6NH52 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TVP23AA6NH52 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TVP23AA6NH52 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TVP23AA6NH52 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TVP23AA6NH52 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TVP23AA6NH52 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.08□□□□□ -0.16
TVP23AA6NH52 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TVP23AA6NH52 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
TVP23AA6NH52 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TVP23AA6NH52 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.08□□□□□ -0.16
TVP23AA6NH52 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TVP23AA6NH52 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.08□□□□□ -0.16
TVP23AA6NH52 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TVP23AA6NH52 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TVP23AA6NH52 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TVP23AA6NH52 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms