Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.6■□□□□ 0.41
COL20A1Q9P218 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 AC016694.1-201ENST00000434179 700 ntBASIC17.6■□□□□ 0.41
COL20A1Q9P218 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 AL583810.1-201ENST00000553344 1045 ntBASIC17.6■□□□□ 0.41
COL20A1Q9P218 BX539320.1-201ENST00000623759 877 ntBASIC17.6■□□□□ 0.41
COL20A1Q9P218 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 AL138709.1-201ENST00000614840 1693 ntBASIC17.6■□□□□ 0.41
COL20A1Q9P218 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
COL20A1Q9P218 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL20A1Q9P218 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL20A1Q9P218 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL20A1Q9P218 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.59■□□□□ 0.41
COL20A1Q9P218 AC092850.2-201ENST00000623821 2697 ntBASIC17.59■□□□□ 0.41
COL20A1Q9P218 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.59■□□□□ 0.41
COL20A1Q9P218 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL20A1Q9P218 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL20A1Q9P218 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COL20A1Q9P218 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL20A1Q9P218 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL20A1Q9P218 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL20A1Q9P218 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL20A1Q9P218 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL20A1Q9P218 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.59■□□□□ 0.41
COL20A1Q9P218 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.59■□□□□ 0.41
COL20A1Q9P218 AC026954.1-201ENST00000429771 1293 ntBASIC17.59■□□□□ 0.41
COL20A1Q9P218 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
COL20A1Q9P218 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL20A1Q9P218 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.59■□□□□ 0.41
COL20A1Q9P218 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.59■□□□□ 0.41
COL20A1Q9P218 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL20A1Q9P218 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COL20A1Q9P218 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.59■□□□□ 0.41
COL20A1Q9P218 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
COL20A1Q9P218 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.59■□□□□ 0.41
COL20A1Q9P218 AC025279.2-201ENST00000569730 653 ntBASIC17.59■□□□□ 0.41
COL20A1Q9P218 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.59■□□□□ 0.41
COL20A1Q9P218 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.59■□□□□ 0.41
COL20A1Q9P218 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL20A1Q9P218 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL20A1Q9P218 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.59■□□□□ 0.41
COL20A1Q9P218 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL20A1Q9P218 AC105250.1-201ENST00000509378 2057 ntBASIC17.59■□□□□ 0.41
COL20A1Q9P218 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
COL20A1Q9P218 AC148477.4-201ENST00000613430 1793 ntBASIC17.58■□□□□ 0.41
COL20A1Q9P218 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL20A1Q9P218 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL20A1Q9P218 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL20A1Q9P218 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.58■□□□□ 0.41
COL20A1Q9P218 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.58■□□□□ 0.41
COL20A1Q9P218 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL20A1Q9P218 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL20A1Q9P218 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL20A1Q9P218 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL20A1Q9P218 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL20A1Q9P218 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL20A1Q9P218 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
COL20A1Q9P218 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL20A1Q9P218 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL20A1Q9P218 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL20A1Q9P218 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.58■□□□□ 0.4
COL20A1Q9P218 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.58■□□□□ 0.4
COL20A1Q9P218 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL20A1Q9P218 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.58■□□□□ 0.4
COL20A1Q9P218 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.58■□□□□ 0.4
COL20A1Q9P218 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.58■□□□□ 0.4
COL20A1Q9P218 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.58■□□□□ 0.4
COL20A1Q9P218 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.58■□□□□ 0.4
COL20A1Q9P218 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.58■□□□□ 0.4
COL20A1Q9P218 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.58■□□□□ 0.4
COL20A1Q9P218 AC145423.3-201ENST00000615987 467 ntBASIC17.58■□□□□ 0.4
COL20A1Q9P218 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms