Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 AC026434.2-201ENST00000506094 1078 ntBASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 AC006058.4-201ENST00000624016 1670 ntBASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 AP000356.3-201ENST00000382243 753 ntBASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 MIR1227-201ENST00000408484 88 ntBASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 AC006122.1-201ENST00000493323 440 ntBASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 AC127024.7-201ENST00000625101 200 ntBASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC31.06■■■□□ 2.56
CCDC180Q9P1Z9 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 MIR557-201ENST00000385239 98 ntBASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 AC012441.2-201ENST00000444843 739 ntBASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CCDC180Q9P1Z9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC180Q9P1Z9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
CCDC180Q9P1Z9 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC180Q9P1Z9 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC180Q9P1Z9 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC180Q9P1Z9 AL157407.1-201ENST00000435784 904 ntBASIC31.04■■■□□ 2.56
CCDC180Q9P1Z9 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC31.04■■■□□ 2.56
CCDC180Q9P1Z9 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
CCDC180Q9P1Z9 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC31.04■■■□□ 2.56
CCDC180Q9P1Z9 MIR6858-201ENST00000620733 67 ntBASIC31.04■■■□□ 2.56
CCDC180Q9P1Z9 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
CCDC180Q9P1Z9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
CCDC180Q9P1Z9 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 AL512430.1-201ENST00000392575 860 ntBASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 RPL7P35-201ENST00000446943 740 ntBASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 RNF165-205ENST00000588679 2904 ntBASIC31.03■■■□□ 2.56
CCDC180Q9P1Z9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 AL645933.1-201ENST00000440087 609 ntBASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 AC079112.1-201ENST00000454972 939 ntBASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 FRMPD2B-201ENST00000431305 1347 ntBASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 KRT8P31-201ENST00000504812 1408 ntBASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 AL022344.2-201ENST00000568976 968 ntBASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 AC009084.3-201ENST00000623356 437 ntBASIC31.02■■■□□ 2.56
CCDC180Q9P1Z9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms