Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 AL513190.1-201ENST00000621254 727 ntBASIC18.87■□□□□ 0.61
RNF216Q9NWF9 AC026124.2-201ENST00000621847 656 ntBASIC18.87■□□□□ 0.61
RNF216Q9NWF9 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 AC009949.1-201ENST00000623048 1830 ntBASIC18.86■□□□□ 0.61
RNF216Q9NWF9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 AC068446.1-201ENST00000556425 1549 ntBASIC18.86■□□□□ 0.61
RNF216Q9NWF9 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 AL353706.1-201ENST00000436728 494 ntBASIC18.86■□□□□ 0.61
RNF216Q9NWF9 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 NDUFA5P9-201ENST00000472609 340 ntBASIC18.86■□□□□ 0.61
RNF216Q9NWF9 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 PDPK2P-202ENST00000562415 1191 ntBASIC18.86■□□□□ 0.61
RNF216Q9NWF9 AC023824.3-201ENST00000569003 562 ntBASIC18.86■□□□□ 0.61
RNF216Q9NWF9 AC107982.3-201ENST00000584957 985 ntBASIC18.86■□□□□ 0.61
RNF216Q9NWF9 AL031673.1-201ENST00000611460 466 ntBASIC18.86■□□□□ 0.61
RNF216Q9NWF9 AC121761.2-201ENST00000617300 689 ntBASIC18.86■□□□□ 0.61
RNF216Q9NWF9 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 AGGF1P2-201ENST00000426656 2106 ntBASIC18.86■□□□□ 0.61
RNF216Q9NWF9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 ELL2P1-201ENST00000413990 1906 ntBASIC18.86■□□□□ 0.61
RNF216Q9NWF9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF216Q9NWF9 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 ZNF506-202ENST00000450683 1385 ntAPPRIS ALT2 TSL 4 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 KRT18P28-201ENST00000453838 1332 ntBASIC18.85■□□□□ 0.61
RNF216Q9NWF9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 RNU6-192P-201ENST00000391253 100 ntBASIC18.85■□□□□ 0.61
RNF216Q9NWF9 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 AC007879.1-201ENST00000435643 554 ntTSL 4 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 AC007834.2-201ENST00000536310 343 ntBASIC18.85■□□□□ 0.61
RNF216Q9NWF9 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF216Q9NWF9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms