Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 AL353732.1-201ENST00000569618 1459 ntBASIC11.98□□□□□ -0.49
AP1S3Q96PC3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 AP000867.3-201ENST00000524675 377 ntBASIC11.98□□□□□ -0.49
AP1S3Q96PC3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 AC087641.1-201ENST00000557561 1021 ntBASIC11.98□□□□□ -0.49
AP1S3Q96PC3 AC012615.1-201ENST00000565797 1299 ntBASIC11.98□□□□□ -0.49
AP1S3Q96PC3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 AC099336.1-202ENST00000602961 463 ntBASIC11.98□□□□□ -0.49
AP1S3Q96PC3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 AC010654.1-201ENST00000615722 808 ntBASIC11.98□□□□□ -0.49
AP1S3Q96PC3 AL589182.2-201ENST00000619332 1049 ntBASIC11.98□□□□□ -0.49
AP1S3Q96PC3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
AP1S3Q96PC3 MEX3B-202ENST00000558133 4333 ntBASIC11.97□□□□□ -0.49
AP1S3Q96PC3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 AC112504.1-201ENST00000623415 1841 ntBASIC11.97□□□□□ -0.49
AP1S3Q96PC3 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 AC069224.1-201ENST00000566372 1715 ntBASIC11.97□□□□□ -0.49
AP1S3Q96PC3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 AC211429.1-201ENST00000415277 523 ntBASIC11.97□□□□□ -0.49
AP1S3Q96PC3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 RN7SL850P-201ENST00000579959 291 ntBASIC11.97□□□□□ -0.49
AP1S3Q96PC3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC11.97□□□□□ -0.49
AP1S3Q96PC3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms