Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CASD1Q96PB1 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CASD1Q96PB1 AL139094.1-201ENST00000405549 1188 ntBASIC16.57■□□□□ 0.24
CASD1Q96PB1 MTX1P1-201ENST00000440904 838 ntBASIC16.57■□□□□ 0.24
CASD1Q96PB1 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.57■□□□□ 0.24
CASD1Q96PB1 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.57■□□□□ 0.24
CASD1Q96PB1 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASD1Q96PB1 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
CASD1Q96PB1 EEF1DP1-201ENST00000585891 896 ntBASIC16.57■□□□□ 0.24
CASD1Q96PB1 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CASD1Q96PB1 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CASD1Q96PB1 AC068587.10-201ENST00000641210 219 ntBASIC16.57■□□□□ 0.24
CASD1Q96PB1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CASD1Q96PB1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASD1Q96PB1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CASD1Q96PB1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASD1Q96PB1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 B9D1-203ENST00000395615 805 ntTSL 3 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 AL645937.2-201ENST00000396808 931 ntBASIC16.56■□□□□ 0.24
CASD1Q96PB1 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 CNN2P10-201ENST00000443067 918 ntBASIC16.56■□□□□ 0.24
CASD1Q96PB1 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 AC004066.1-201ENST00000502488 802 ntBASIC16.56■□□□□ 0.24
CASD1Q96PB1 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASD1Q96PB1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CASD1Q96PB1 AC084364.1-201ENST00000551967 1556 ntBASIC16.55■□□□□ 0.24
CASD1Q96PB1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 AL354989.2-201ENST00000435838 1540 ntBASIC16.55■□□□□ 0.24
CASD1Q96PB1 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 LRRC59-203ENST00000576448 1531 ntBASIC16.55■□□□□ 0.24
CASD1Q96PB1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASD1Q96PB1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASD1Q96PB1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASD1Q96PB1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CASD1Q96PB1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CASD1Q96PB1 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASD1Q96PB1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASD1Q96PB1 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASD1Q96PB1 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CASD1Q96PB1 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASD1Q96PB1 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASD1Q96PB1 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CASD1Q96PB1 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 AP006547.1-201ENST00000563435 692 ntBASIC16.55■□□□□ 0.24
CASD1Q96PB1 AC104982.3-201ENST00000581995 514 ntBASIC16.55■□□□□ 0.24
CASD1Q96PB1 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.55■□□□□ 0.24
CASD1Q96PB1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms